RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SLC18B1Q6NT16 456 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 GGT3PA6NGU5 568 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 PRSS44E7EML9 344 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 OR2T7P0C7T2 308 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 GNMTQ14749 295 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 STK11Q15831 433 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 PUS10Q3MIT2 529 aaKnown RBP16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 LRFN4Q6PJG9 635 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 OR4N5Q8IXE1 308 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 OR2T27Q8NH04 317 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 SMARCD2Q92925 531 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 B4DGG1 531 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 H2BFMP0C1H6 154 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 FAM219BQ5XKK7 198 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 ACOT4Q8N9L9 421 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 RBP7Q96R05 134 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 KATNBL1Q9H079 304 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 NARFLQ9H6Q4 476 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 CWH43Q9H720 699 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 EVA1AQ9H8M9 152 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 TMEM82A0PJX8 343 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 FADS1O60427 444 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 CTXN1P60606 82 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 SIM1P81133 766 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 RAB33AQ14088 237 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 ACSM5Q6NUN0 579 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 GLCCI1Q86VQ1 547 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 MARC2Q969Z3 335 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 TMEM121BQ9BXQ6 578 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 PIGMQ9H3S5 423 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 MED20Q9H944 212 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 SLAMF7Q9NQ25 335 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 MICAL3Q7RTP6 2002 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 TXNL1O43396 289 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 SSX4O60224 188 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 FBXO45P0C2W1 286 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 GLP1RP43220 463 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 SLC6A12P48065 614 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 ARHGAP40Q5TG30 622 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 NKX6-2Q9C056 277 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 PRODH2Q9UF12 536 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 PHIPQ8WWQ0 1821 aa16.06■□□□□ 0.16
HMGXB3-201ENST00000502717 VSTM5A8MXK1 200 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 C11orf98E9PRG8 122 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 HLA-AP01891 365 aaKnown RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 IGFBP1P08833 259 aaPredicted RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 C1SP09871 688 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 CTSOP43234 321 aaPredicted RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 CXADRP78310 365 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 C6orf132Q5T0Z8 1188 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 VRK3Q8IV63 474 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 FGF20Q9NP95 211 aaPredicted RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 COL24A1Q17RW2 1714 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 MEIS3P1A6NDR6 274 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 B4GALT2O60909 372 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 ADH1BP00325 375 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 TP53P04637 393 aaPredicted RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 FUT1P19526 365 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 DYRK1AQ13627 763 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 P2RY14Q15391 338 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 VRK1Q99986 396 aaPredicted RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 SEC61A2Q9H9S3 476 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 SIX6O95475 246 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 CD53P19397 219 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 HOXA9P31269 272 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 ALG1LQ6GMV1 187 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 ACBD4Q8NC06 268 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 PNO1Q9NRX1 252 aaKnown RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 TRAV27A0A087WT01 109 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 SOX1O00570 391 aaPredicted RBP16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 BDH1Q02338 343 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 SMUG1Q53HV7 270 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 BEX5Q5H9J7 111 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 DPPA4Q7L190 304 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 CDS1Q92903 461 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 HLA-CQ95604 372 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 SLC6A13Q9NSD5 602 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 TMEM30AQ9NV96 361 aa16.05■□□□□ 0.16
HMGXB3-201ENST00000502717 GABARAPH6UMI1 98 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 OR1Q1Q15612 314 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 CST9Q5W186 159 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 PRICKLE2Q7Z3G6 844 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 OR5T3Q8NGG3 340 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 KCNJ16Q9NPI9 418 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 ZFP57Q9NU63 452 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 CA14Q9ULX7 337 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 ETV7Q9Y603 341 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 AGAP14A8MT82 685 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 PIP5K1CO60331 668 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 RBMXL2O75526 392 aaKnown RBP16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 GXYLT1Q4G148 440 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 WDSUB1Q8N9V3 476 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 ANKRD53Q8N9V6 530 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 TTC9Q92623 222 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 TOX2Q96NM4 488 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 PDFQ9HBH1 243 aa16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 SIDT1Q9NXL6 827 aaKnown RBP16.04■□□□□ 0.16
HMGXB3-201ENST00000502717 H3BQ06 376 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms