RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 OR5P2Q8WZ92 322 aa14.08□□□□□ -0.16
MUC1-220ENST00000498431 ST8SIA1Q92185 356 aa14.08□□□□□ -0.16
MUC1-220ENST00000498431 MSI2Q96DH6 328 aaKnown RBP14.08□□□□□ -0.16
MUC1-220ENST00000498431 ARL5BQ96KC2 179 aa14.08□□□□□ -0.16
MUC1-220ENST00000498431 MUS81Q96NY9 551 aa14.08□□□□□ -0.16
MUC1-220ENST00000498431 ASB6Q9NWX5 421 aa14.08□□□□□ -0.16
MUC1-220ENST00000498431 MALT1Q9UDY8 824 aa14.08□□□□□ -0.16
MUC1-220ENST00000498431 TENM1Q9UKZ4 2725 aa14.08□□□□□ -0.16
MUC1-220ENST00000498431 LOC100289279A0A1B0GTE1 492 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 PIP5K1BO14986 540 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 FCMRO60667 390 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 CSF3P09919 207 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 UBTFL6P0CB48 400 aaPredicted RBP14.07□□□□□ -0.16
MUC1-220ENST00000498431 TFPIP10646 304 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 GZMKP49863 264 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 UGT3A2Q3SY77 523 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 FAM166AQ6J272 317 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 HDXQ7Z353 690 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 DDIASQ8IXT1 998 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 DEPDC4Q8N2C3 294 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 KRTCAP2Q8N6L1 136 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 SFXN5Q8TD22 340 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 TWIST2Q8WVJ9 160 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 C3orf49Q96BT1 292 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 ZIM3Q96PE6 472 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 NMUR2Q9GZQ4 415 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 EML4Q9HC35 981 aaKnown RBP14.07□□□□□ -0.16
MUC1-220ENST00000498431 CTPS2Q9NRF8 586 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 SERINC1Q9NRX5 453 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 ACER3Q9NUN7 267 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 KCNS2Q9ULS6 477 aa14.07□□□□□ -0.16
MUC1-220ENST00000498431 IGHV4-61A0A0C4DH41 118 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 ATP6V1G2-DDX39BF2Z307 99 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 PDLIM1O00151 329 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 UGT2B17O75795 530 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 CSTAP01040 98 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 CHRNGP07510 517 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 KRT16P08779 473 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 CRHR1P34998 444 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 NR4A2P43354 598 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 PCLAFQ15004 111 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 ZNF141Q15928 474 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 MAPK14Q16539 360 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 MST1LQ2TV78 715 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 KRT71Q3SY84 523 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 CLEC4FQ8N1N0 589 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 ARL8AQ96BM9 186 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 FBXO17Q96EF6 278 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 SORCS2Q96PQ0 1159 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 C1orf50Q9BV19 199 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 CCDC106Q9BWC9 280 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 OR11A1Q9GZK7 315 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 MKLN1Q9UL63 735 aa14.06□□□□□ -0.16
MUC1-220ENST00000498431 PEX11AO75192 247 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 MRPL33O75394 65 aaKnown RBP14.05□□□□□ -0.16
MUC1-220ENST00000498431 CHEK2O96017 543 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 PGCP20142 388 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 APOBEC3AP31941 199 aaPredicted RBP14.05□□□□□ -0.16
MUC1-220ENST00000498431 CCT5P48643 541 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 SLC16A1P53985 500 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 HBA1P69905 142 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 CHRNB3Q05901 458 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 SWI5Q1ZZU3 235 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 CEP85LQ5SZL2 805 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 OR7E24Q6IFN5 339 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 PIGXQ8TBF5 258 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 SLC25A43Q8WUT9 341 aaPredicted RBP14.05□□□□□ -0.16
MUC1-220ENST00000498431 TMEM234Q8WY98 164 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 COQ8BQ96D53 544 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 C3orf30Q96M34 536 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 SOX7Q9BT81 388 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 FKRPQ9H9S5 495 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 SLC17A5Q9NRA2 495 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 CHRNA9Q9UGM1 479 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 LGALS13Q9UHV8 139 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 PMF1-BGLAPU3KQ54 211 aa14.05□□□□□ -0.16
MUC1-220ENST00000498431 TMEM114B3SHH9 223 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 GPR171O14626 319 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 CFLARO15519 480 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 PMS2P2O95744 297 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 APEHP13798 732 aaKnown RBP14.04□□□□□ -0.16
MUC1-220ENST00000498431 DDX5P17844 614 aaKnown RBP14.04□□□□□ -0.16
MUC1-220ENST00000498431 SOAT1P35610 550 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 RPL3P39023 403 aaKnown RBP14.04□□□□□ -0.16
MUC1-220ENST00000498431 PDLIM4P50479 330 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 PHC1P78364 1004 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 PLAURQ03405 335 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 LSM12Q3MHD2 195 aaKnown RBP14.04□□□□□ -0.16
MUC1-220ENST00000498431 XKR7Q5GH72 579 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 CASP12Q6UXS9 341 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 HMGN2P46Q86SG4 172 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 ANKS4BQ8N8V4 417 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 FAM71CQ8NEG0 241 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 AGR3Q8TD06 166 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 ZHX1-C8orf76Q96EF9 292 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 C1orf159Q96HA4 380 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 FOXN4Q96NZ1 517 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 PIMREGQ9BSJ6 248 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 ZNF350Q9GZX5 532 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 SLC7A10Q9NS82 523 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms