RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 OR5P2Q8WZ92 322 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 MRPL48Q96GC5 212 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 NRTNQ99748 197 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF251Q9BRH9 671 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 ENKD1Q9H0I2 346 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 KCNK7Q9Y2U2 307 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 OR2AT4A6NND4 320 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 CDC42EP2O14613 210 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 SCAMP1O15126 338 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 OR2A4O95047 310 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 EPPINO95925 133 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 SAGP10523 405 aaPredicted RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 ELNP15502 786 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 TRHRP34981 398 aaPredicted RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 PPT1P50897 306 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 SHC2P98077 582 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 COL19A1Q14993 1142 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 MAPK14Q16539 360 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 ZC3H14Q6PJT7 736 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 CD300LDQ6UXZ3 194 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 Q6ZVL8 140 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 EIF4E3Q8N5X7 224 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 OR52L1Q8NGH7 329 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 OR2A7Q96R45 310 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 UBQLN3Q9H347 655 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 GHRLQ9UBU3 117 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 B4GALT6Q9UBX8 382 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 EXOGQ9Y2C4 368 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 SERTM1A2A2V5 107 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 OR6C76A6NM76 312 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 IGSF6O95976 241 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 IFNA4P05014 189 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 AKR1A1P14550 325 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 TYRP14679 529 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 BMP7P18075 431 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 FPR3P25089 353 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 CBFBQ13951 182 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF750Q32MQ0 723 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 SSX6Q7RTT6 188 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 TAS1R1Q7RTX1 841 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 NAA40Q86UY6 237 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 TMEM173Q86WV6 379 aaPredicted RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 RASL12Q9NYN1 266 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 NPFFR2Q9Y5X5 522 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 MYO9BQ13459 2157 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 SYT5O00445 386 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 UBBP0CG47 229 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 UBCP0CG48 685 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 C1GALT1C1LP0DN25 315 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 CPN1P15169 458 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 MPIP34949 423 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 RPS15P62841 145 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 RPS27AP62979 156 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 UBA52P62987 128 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 SRSF3P84103 164 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ST3GAL3Q11203 375 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 UBE2NLQ5JXB2 153 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 RTP2Q5QGT7 225 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 TPRG1Q6ZUI0 275 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 MEPCEQ7L2J0 689 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 LINC00471Q8N535 108 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 RAD51AP1Q96B01 352 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 C16orf58Q96GQ5 468 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ZC3H10Q96K80 434 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 CHST6Q9GZX3 395 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 GABARAPH6UMI1 98 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ICOSLGO75144 302 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 CSN2P05814 226 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 RNF224P0DH78 156 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ADCYAP1P18509 176 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 EDNRAP25101 427 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 EIF1P41567 113 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ACSM1Q08AH1 577 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM109BQ6ICB4 259 aaPredicted RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 NIPAL3Q6P499 406 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 INTS12Q96CB8 462 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 BBS4Q96RK4 519 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 VRK1Q99986 396 aaPredicted RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 MRPS30Q9NP92 439 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ZFP57Q9NU63 452 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF629Q9UEG4 869 aaPredicted RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 GNG8Q9UK08 70 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 MKL2Q9ULH7 1088 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 SLC16A5O15375 505 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 AQP8O94778 261 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 GP1BAP07359 652 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 MPGP29372 298 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 GRPRP30550 384 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 SOX2P48431 317 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms