RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 MERTKQ12866 999 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 KLRB1Q12918 225 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 DGCR6Q14129 220 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 LAPTM4AQ15012 233 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 TRAM2Q15035 370 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 COLEC12Q5KU26 742 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 WIPI1Q5MNZ9 446 aaPredicted RBP12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 ZBTB49Q6ZSB9 765 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 STK32CQ86UX6 486 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 ZDHHC13Q8IUH4 622 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 NKAIN4Q8IVV8 208 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 TEX19Q8NA77 164 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 OR5M1Q8NGP8 315 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 OR5K1Q8NHB7 308 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 OR14L1PQ8NHC6 308 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 MPP4Q96JB8 637 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 UBL7Q96S82 380 aaPredicted RBP12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 FUZQ9BT04 418 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 ZNF426Q9BUY5 554 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 KLHL4Q9C0H6 718 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 COQ10BQ9H8M1 238 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 NTN4Q9HB63 628 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 TFECO14948 347 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 PNMTP11086 282 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 DNAJA1P31689 397 aaKnown RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 GFRA1P56159 465 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 SMIM11AP58511 58 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 IL1RL1Q01638 556 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 SLC10A1Q14973 349 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 CMPK2Q5EBM0 449 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 RAET1LQ5VY80 246 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 SIAH3Q8IW03 269 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 HS3ST5Q8IZT8 346 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 OR4C15Q8NGM1 316 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 SLC7A13Q8TCU3 470 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 PIGQQ9BRB3 760 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 C9orf16Q9BUW7 83 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 VCXQ9H320 206 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 SELENONQ9NZV5 590 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 PDP1Q9P0J1 537 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 TMCC3Q9ULS5 477 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 SHANK1Q9Y566 2161 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 ARHGAP21Q5T5U3 1957 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 SPENQ96T58 3664 aaKnown RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 ATRXP46100 2492 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 TRBV4-1A0A0J9YWV2 114 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 ELOA3DA6NLF2 546 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 CASQ2O14958 399 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 IGHG3P01860 377 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 CRYABP02511 175 aaKnown RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 IL11P20809 199 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 FPR1P21462 350 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 PRKACGP22612 351 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 CXCR1P25024 350 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 ELK4P28324 431 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 ALDH6A1Q02252 535 aaKnown RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 EXOC3L2Q2M3D2 409 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 ELOA3BQ3SY89 546 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 OGFRL1Q5TC84 451 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 POMZP3Q6PJE2 187 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 TMEM179BQ7Z7N9 219 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 HIPK1Q86Z02 1210 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 CBR4Q8N4T8 237 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 ELOA3Q8NG57 546 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 TMEM255BQ8WV15 326 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 EPYCQ99645 322 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 DEFB127Q9H1M4 99 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 SLC6A15Q9H2J7 730 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 CHRNA9Q9UGM1 479 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 MAGED1Q9Y5V3 778 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 LIPGQ9Y5X9 500 aa12.61□□□□□ -0.39
ATPAF2-208ENST00000496852 NBEAQ8NFP9 2946 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 IGKV1D-42A0A075B6H8 117 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 A0A087WUU8 490 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 TMEM72A0PK05 275 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 WISP2O76076 250 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 CHMP24386 653 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 RBM34P42696 430 aaKnown RBP12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 MAP2K6P52564 334 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 EGR4Q05215 589 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 SELENBP1Q13228 472 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 GK3PQ14409 553 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 DCST1Q5T197 706 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 ZNF324BQ6AW86 544 aaPredicted RBP12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 SVOPLQ8N434 492 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 MAGEE2Q8TD90 523 aaPredicted RBP12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 ACOT11Q8WXI4 607 aaPredicted RBP12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 SFXN2Q96NB2 322 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 ALPK1Q96QP1 1244 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 TSPAN10Q9H1Z9 355 aaPredicted RBP12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 PLSCR2Q9NRY7 297 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 KIF17Q9P2E2 1029 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 ZNF337Q9Y3M9 751 aa12.6□□□□□ -0.39
ATPAF2-208ENST00000496852 LINC01387J3KSC0 135 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 SOCS2O14508 198 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 ZNF208O43345 1280 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 SUSD5O60279 629 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms