RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ADAMTS16Q8TE57 1224 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 SCFD1Q8WVM8 642 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 PRRC1Q96M27 445 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 AMDHD1Q96NU7 426 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 CITED1Q99966 193 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 CENPKQ9BS16 269 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 COMMD4Q9H0A8 199 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 CHMP4BQ9H444 224 aaKnown RBP2.85□□□□□ -1.95
CLK1-214ENST00000496205 GEMIN7Q9H840 131 aaKnown RBP2.85□□□□□ -1.95
CLK1-214ENST00000496205 MRPL22Q9NWU5 206 aaKnown RBP2.85□□□□□ -1.95
CLK1-214ENST00000496205 CLEC5AQ9NY25 188 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 MRPL39Q9NYK5 338 aaKnown RBP2.85□□□□□ -1.95
CLK1-214ENST00000496205 GCNT4Q9P109 453 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 CYTH4Q9UIA0 394 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 LCMT1Q9UIC8 334 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 ANAPC7Q9UJX3 599 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 IKZF2Q9UKS7 526 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 BARX2Q9UMQ3 279 aaPredicted RBP2.85□□□□□ -1.95
CLK1-214ENST00000496205 MAP3K19Q56UN5 1328 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 TDRD15B5MCY1 1934 aaKnown RBP2.85□□□□□ -1.95
CLK1-214ENST00000496205 NINLQ9Y2I6 1382 aa2.85□□□□□ -1.95
CLK1-214ENST00000496205 AGRNO00468 2067 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 TRAV25A0A0B4J276 109 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 BTBD17A6NE02 478 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 TUBAL3A6NHL2 446 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 SUPT3HB4E1H0 165 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 GOLGA8TH3BQL2 631 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 ZNF701M0R085 212 aaPredicted RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 CDX4O14627 284 aaPredicted RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 NVLO15381 856 aaKnown RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 SRPX2O60687 465 aaPredicted RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 KBTBD11O94819 623 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 SNAI1O95863 264 aaPredicted RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 NPPAP01160 153 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 FTH1P02794 183 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 SDC1P18827 310 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 ANXA13P27216 316 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 CASP14P31944 242 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 ALDH3B2P48448 385 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 CASP4P49662 377 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 NOVA1P51513 510 aaKnown RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 EFNB2P52799 333 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 RPL8P62917 257 aaKnown RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 NTHL1P78549 312 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 EWSR1Q01844 656 aaKnown RBP eCLIP2.84□□□□□ -1.95
CLK1-214ENST00000496205 OGDHQ02218 1023 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 PEX6Q13608 980 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 RUNX3Q13761 415 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 CRMP1Q14194 572 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 SLC10A1Q14973 349 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 CHRNA6Q15825 494 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 SLC15A2Q16348 729 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 EIPR1Q53HC9 387 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 HSP90AA4PQ58FG1 418 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 PLCXD3Q63HM9 321 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 TMUB2Q71RG4 321 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 VTCN1Q7Z7D3 282 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 KIAA1328Q86T90 577 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 OFCC1Q8IZS5 231 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 TMEM123Q8N131 208 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 TRIML2Q8N7C3 387 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 OR7G2Q8NG99 324 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 OR51G2Q8NGK0 314 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 CNIH3Q8TBE1 160 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 RASL10AQ92737 203 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 NRBF2Q96F24 287 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 ZBED3Q96IU2 234 aaPredicted RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 C1orf147Q96MC9 270 aaPredicted RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 CCT8L2Q96SF2 557 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 BPIFA3Q9BQP9 254 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 GLT8D2Q9H1C3 349 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 BLZF1Q9H2G9 400 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 LRRN3Q9H3W5 708 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 RGCCQ9H4X1 137 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 IKZF5Q9H5V7 419 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 SUDS3Q9H7L9 328 aaPredicted RBP2.84□□□□□ -1.95
CLK1-214ENST00000496205 RAB18Q9NP72 206 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 ZNF581Q9P0T4 197 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 ABCG2Q9UNQ0 655 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 GMEB1Q9Y692 573 aa2.84□□□□□ -1.95
CLK1-214ENST00000496205 GRIN2DO15399 1336 aa2.84□□□□□ -1.96
CLK1-214ENST00000496205 ZNF318Q5VUA4 2279 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 TRBV7-9A0A0J9YWB2 115 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 LOC100506127A0A0U1RQW1 187 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 A0A1B0GVL5 298 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 HSBP1L1C9JCN9 74 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 K7ERQ8 282 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 FOXE1O00358 373 aaPredicted RBP2.83□□□□□ -1.96
CLK1-214ENST00000496205 ABCD4O14678 606 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 POLR1CO15160 346 aaPredicted RBP2.83□□□□□ -1.96
CLK1-214ENST00000496205 NMT2O60551 498 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 STX11O75558 287 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 SLC2A10O95528 541 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 F10P00742 488 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 CSTAP01040 98 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 ACADSP16219 412 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 GCFC2P16383 781 aaKnown RBP2.83□□□□□ -1.96
CLK1-214ENST00000496205 CYP2B6P20813 491 aa2.83□□□□□ -1.96
CLK1-214ENST00000496205 U2AF2P26368 475 aaKnown RBP eCLIP2.83□□□□□ -1.961e-7■■□□□ 12.8
CLK1-214ENST00000496205 CHMLP26374 656 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms