RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 IGFBP1P08833 259 aaPredicted RBP22.17■■□□□ 1.14
PPP1R3F-205ENST00000495799 CYB561P49447 251 aa22.17■■□□□ 1.14
PPP1R3F-205ENST00000495799 B3GNTL1Q67FW5 361 aaPredicted RBP22.17■■□□□ 1.14
PPP1R3F-205ENST00000495799 SMARCD3Q6STE5 483 aa22.17■■□□□ 1.14
PPP1R3F-205ENST00000495799 OAFQ86UD1 273 aa22.17■■□□□ 1.14
PPP1R3F-205ENST00000495799 OR52D1Q9H346 318 aa22.17■■□□□ 1.14
PPP1R3F-205ENST00000495799 TPRKBQ9Y3C4 175 aa22.17■■□□□ 1.14
PPP1R3F-205ENST00000495799 IGKV1D-42A0A075B6H8 117 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 A0A087WXM4 84 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 TMED7-TICAM2A0A0A6YYA0 188 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 SLC1A7O00341 560 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 APOBEC1P41238 236 aaKnown RBP22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 TBC1D25Q3MII6 688 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 PRAMEF20Q5VT98 475 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 PLCZ1Q86YW0 608 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 BEST3Q8N1M1 668 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 FADS6Q8N9I5 356 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 OR2T33Q8NG76 320 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 OR2M3Q8NG83 312 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 OR8J1Q8NGP2 316 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 Q96MT0 163 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 PLA2G12AQ9BZM1 189 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 SACM1LQ9NTJ5 587 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 CLN6Q9NWW5 311 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 ZNF226Q9NYT6 803 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 STMN3Q9NZ72 180 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 TMED7Q9Y3B3 224 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 ZNF337Q9Y3M9 751 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 CUL9Q8IWT3 2517 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 FAM186AA6NE01 2351 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 DCDC2BA2VCK2 349 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 TRIM64A6NGJ6 449 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 HMGN1P05114 100 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 CCL3P10147 92 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 PRKCAP17252 672 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 CRHBPP24387 322 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 MAP2K6P52564 334 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 SNRPGP62308 76 aaKnown RBP22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 TUBA4AP68366 448 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 ANKDD1AQ495B1 522 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 ZBED5Q49AG3 693 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 VASH2Q86V25 355 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 OR8D4Q8NGM9 314 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 OR13C2Q8NGS9 318 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 STK35Q8TDR2 534 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 TMEM41AQ96HV5 264 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 MRGPRX4Q96LA9 322 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 KLHDC3Q9BQ90 382 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 POLDIP3Q9BY77 421 aaKnown RBP22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 NDEL1Q9GZM8 345 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 MED17Q9NVC6 651 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 TVP23BQ9NYZ1 205 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 BAIAP2Q9UQB8 552 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 SIGLEC7Q9Y286 467 aa22.16■■□□□ 1.14
PPP1R3F-205ENST00000495799 A0A087WZY1 265 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 TRABD2BA6NFA1 517 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 ETV2O00321 342 aaPredicted RBP22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 SMNDC1O75940 238 aaKnown RBP eCLIP22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 SMIM18P0DKX4 95 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 MASP1P48740 699 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 PCYT1AP49585 367 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 PGGHGQ32M88 737 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 CRTC2Q53ET0 693 aaPredicted RBP22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 SLC25A53Q5H9E4 307 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 IQCF1Q8N6M8 205 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 BPIFB6Q8NFQ5 453 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 LIPHQ8WWY8 451 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 DTNBP1Q96EV8 351 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 SAMD8Q96LT4 415 aa22.15■■□□□ 1.14
PPP1R3F-205ENST00000495799 RIF1Q5UIP0 2472 aaKnown RBP22.14■■□□□ 1.14
PPP1R3F-205ENST00000495799 TRAV36DV7A0A075B6V5 113 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 SH3D21A4FU49 640 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 A8MVM7 634 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 SNPHO15079 494 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 SUSD5O60279 629 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 CH25HO95992 272 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 CLPTM1O96005 669 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 GABRB1P18505 474 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 FUT1P19526 365 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 EEF1B2P24534 225 aaKnown RBP22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 FMO3P31513 532 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 SLC6A6P31641 620 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 OC90Q02509 493 aaPredicted RBP22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 APOFQ13790 326 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 SNAPC1Q16533 368 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 C10orf53Q8N6V4 93 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 APH1BQ8WW43 257 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 ZNF524Q96C55 264 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 NTNG2Q96CW9 530 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 PLEKHA8Q96JA3 519 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 CCNB1IP1Q9NPC3 277 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 TIMMDC1Q9NPL8 285 aa22.14■■□□□ 1.13
PPP1R3F-205ENST00000495799 ZNF891A8MT65 544 aaPredicted RBP22.13■■□□□ 1.13
PPP1R3F-205ENST00000495799 FAM20BO75063 409 aa22.13■■□□□ 1.13
PPP1R3F-205ENST00000495799 PTP4A3O75365 173 aa22.13■■□□□ 1.13
PPP1R3F-205ENST00000495799 WBP4O75554 376 aaKnown RBP22.13■■□□□ 1.13
PPP1R3F-205ENST00000495799 GRK5P34947 590 aa22.13■■□□□ 1.13
PPP1R3F-205ENST00000495799 EIF1P41567 113 aaKnown RBP22.13■■□□□ 1.13
PPP1R3F-205ENST00000495799 ZNF74Q16587 644 aa22.13■■□□□ 1.13
PPP1R3F-205ENST00000495799 CLEC12AQ5QGZ9 265 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms