RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 HTR2AP28223 471 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 EIF1AXP47813 144 aaKnown RBP15.39■□□□□ 0.05
HDAC6-235ENST00000495515 SUCLG1P53597 346 aaKnown RBP15.39■□□□□ 0.05
HDAC6-235ENST00000495515 CLDN15P56746 228 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 CARD18P57730 90 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 ELOA3BQ3SY89 546 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 ALG10BQ5I7T1 473 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 NSUN5P2Q63ZY6 315 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 HBMQ6B0K9 141 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 C3P1Q6ZMU1 363 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 DHFR2Q86XF0 187 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 ELOA3Q8NG57 546 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 RNF217Q8TC41 542 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 ASB9Q96DX5 294 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 HSH2DQ96JZ2 352 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 TRIB1Q96RU8 372 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 TUBA1CQ9BQE3 449 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 TRIM15Q9C019 465 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-235ENST00000495515 HDGFL3Q9Y3E1 203 aa15.39■□□□□ 0.05
HDAC6-235ENST00000495515 MYO18BQ8IUG5 2567 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 ESPL1Q14674 2120 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 A0A0B4J2E0 115 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 A0A0J9YW62 118 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 A0A1B0GX12 115 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 CLCA1A8K7I4 914 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 A8MVM7 634 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 TMEM229AB2RXF0 380 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 TNFSF11O14788 317 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 GSC2O15499 205 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 SYNGR4O95473 234 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 OR1E2P47887 323 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 CSNK2A1P68400 391 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-235ENST00000495515 TRAP1Q12931 704 aaKnown RBP15.38■□□□□ 0.05
HDAC6-235ENST00000495515 NPTX1Q15818 432 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 ENTPD8Q5MY95 495 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 DEF8Q6ZN54 512 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 P4HA3Q7Z4N8 544 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 VTCN1Q7Z7D3 282 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 ATG4DQ86TL0 474 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-235ENST00000495515 OR4D11Q8NGI4 311 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 OR10Q1Q8NGQ4 319 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 OR10D3Q8NH80 312 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 CCDC124Q96CT7 223 aaKnown RBP15.38■□□□□ 0.05
HDAC6-235ENST00000495515 ADGRG7Q96K78 797 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 LRGUKQ96M69 825 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 OR5B2Q96R09 309 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 UCN2Q96RP3 112 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 WFDC6Q9BQY6 131 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 TTYH2Q9BSA4 534 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 PRR14Q9BWN1 585 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 MMADHCQ9H3L0 296 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-235ENST00000495515 MCTS1Q9ULC4 181 aaKnown RBP15.38■□□□□ 0.05
HDAC6-235ENST00000495515 ZNF175Q9Y473 711 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 FAM215AQ9Y5M1 114 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 ZGRF1Q86YA3 2104 aa15.38■□□□□ 0.05
HDAC6-235ENST00000495515 TMEM72A0PK05 275 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 TRAPPC13A5PLN9 417 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 CPSF4LA6NMK7 179 aaKnown RBP15.37■□□□□ 0.05
HDAC6-235ENST00000495515 H0YC42 278 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 TPST2O60704 377 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 FCGR2AP12318 317 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 TNFRSF1BP20333 461 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 SMSP52788 366 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 TPD52P55327 224 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-235ENST00000495515 TAS2R41P59536 307 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 CTU2Q2VPK5 515 aaKnown RBP15.37■□□□□ 0.05
HDAC6-235ENST00000495515 RTL6Q6ICC9 239 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 LCN8Q6JVE9 175 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 C5orf46Q6UWT4 87 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 RPTNQ6XPR3 784 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 TMPPEQ6ZT21 453 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 CYP4Z1Q86W10 505 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 RBM45Q8IUH3 476 aaKnown RBP15.37■□□□□ 0.05
HDAC6-235ENST00000495515 STK35Q8TDR2 534 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 ADAMTS16Q8TE57 1224 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 RND1Q92730 232 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 OSTF1Q92882 214 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 WNT2BQ93097 391 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 SLC38A4Q969I6 547 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 CPNE4Q96A23 557 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-235ENST00000495515 ZHX1-C8orf76Q96EF9 292 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 PYURFQ96I23 114 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 CLPTM1LQ96KA5 538 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 DMRTA2Q96SC8 542 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 TM9SF2Q99805 663 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 POTEKPQ9BYX7 375 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 PRRG4Q9BZD6 226 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 LRMDAQ9H2I8 198 aa15.37■□□□□ 0.05
HDAC6-235ENST00000495515 SPENQ96T58 3664 aaKnown RBP15.37■□□□□ 0.05
HDAC6-235ENST00000495515 SLC22A20A6NK97 555 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 SULT2B1O00204 365 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 CHP2O43745 196 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 CXCL13O43927 109 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 PRKD3O94806 890 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 AGFG2O95081 481 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 OR5F1O95221 314 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 IL2RAP01589 272 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 GLI4P10075 376 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 THRBP10828 461 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms