RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 EXD2Q9NVH0 621 aa11.85□□□□□ -0.51
ERCC3-209ENST00000494464 PAQR5Q9NXK6 330 aaPredicted RBP11.85□□□□□ -0.51
ERCC3-209ENST00000494464 GALNT8Q9NY28 637 aa11.85□□□□□ -0.51
ERCC3-209ENST00000494464 ICAM5Q9UMF0 924 aa11.85□□□□□ -0.51
ERCC3-209ENST00000494464 USP22Q9UPT9 525 aa11.85□□□□□ -0.51
ERCC3-209ENST00000494464 ANKRD17O75179 2603 aaKnown RBP11.85□□□□□ -0.51
ERCC3-209ENST00000494464 TUBAL3A6NHL2 446 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 A8MXE2 369 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 STX11O75558 287 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 CTAG2O75638 210 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 BMP2P12643 396 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 NCK1P16333 377 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 GPX2P18283 190 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 HSPA13P48723 471 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 KHKP50053 298 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 SNTB1Q13884 538 aaKnown RBP11.84□□□□□ -0.51
ERCC3-209ENST00000494464 ZNF141Q15928 474 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 CTU2Q2VPK5 515 aaKnown RBP11.84□□□□□ -0.51
ERCC3-209ENST00000494464 AP1ARQ63HQ0 302 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 CBLN3Q6UW01 205 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 ESPNLQ6ZVH7 1005 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 LUZP2Q86TE4 346 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 CLEC4FQ8N1N0 589 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 TOR1AIP2Q8NFQ8 470 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 POC1BQ8TC44 478 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 LRTOMTQ8WZ04 291 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 NPAS1Q99742 590 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 KLHDC3Q9BQ90 382 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 OR51I1Q9H343 314 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 C8orf4Q9NR00 106 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 POLE3Q9NRF9 147 aa11.84□□□□□ -0.51
ERCC3-209ENST00000494464 A6NNC1 897 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 CLIC1O00299 241 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 CXCR6O00574 342 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 EIF1AYO14602 144 aaKnown RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 ADAMDEC1O15204 470 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 GSTA4O15217 222 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 OIP5O43482 229 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 KIAA0513O60268 411 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 EIF4E2O60573 245 aaKnown RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 CPSF4O95639 269 aaKnown RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 UBL4AP11441 157 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 FASP25445 335 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 KIR2DL2P43627 348 aaPredicted RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 EIF1AXP47813 144 aaKnown RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 TXNL4AP83876 142 aaKnown RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 FOXF1Q12946 379 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 DAZAP2Q15038 168 aaPredicted RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 SGCBQ16585 318 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 ATAD3BQ5T9A4 648 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 HMBOX1Q6NT76 420 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 VWA1Q6PCB0 445 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 C16orf62Q7Z3J2 963 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 TRIML2Q8N7C3 387 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 ICA1LQ8NDH6 482 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 OR10D3Q8NH80 312 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 STARD4Q96DR4 205 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 ARSGQ96EG1 525 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 AURKBQ96GD4 344 aaPredicted RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 SLC35A5Q9BS91 424 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 RASSF1Q9NS23 344 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 AURKCQ9UQB9 309 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 CARD8Q9Y2G2 431 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 GPC6Q9Y625 555 aaPredicted RBP11.83□□□□□ -0.52
ERCC3-209ENST00000494464 POLQO75417 2590 aa11.83□□□□□ -0.52
ERCC3-209ENST00000494464 SERINC4A6NH21 518 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 GTPBP1O00178 669 aaKnown RBP11.82□□□□□ -0.52
ERCC3-209ENST00000494464 ETV2O00321 342 aaPredicted RBP11.82□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF264O43296 627 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 TIPRLO75663 272 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 UGT2B17O75795 530 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 NTN1O95631 604 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 NUDT14O95848 222 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 GSNP06396 782 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 CD8BP10966 210 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 EPXP11678 715 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 PRKCAP17252 672 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 CHI3L1P36222 383 aaPredicted RBP11.82□□□□□ -0.52
ERCC3-209ENST00000494464 AQP4P55087 323 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 FUT5Q11128 374 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 SKP2Q13309 424 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 GPR68Q15743 365 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 ATP6AP1Q15904 470 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 SLC25A53Q5H9E4 307 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 PDZK1Q5T2W1 519 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 INTS11Q5TA45 600 aaKnown RBP11.82□□□□□ -0.52
ERCC3-209ENST00000494464 TNFAIP8L2Q6P589 184 aaPredicted RBP11.82□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF621Q6ZSS3 439 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 FKBP9P1Q75LS8 142 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 PACRGLQ8N7B6 248 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 CNEP1R1Q8N9A8 125 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 FAM71CQ8NEG0 241 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 OR2V1Q8NHB1 315 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 GPR119Q8TDV5 335 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 ZFP90Q8TF47 636 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 MRGPRX4Q96LA9 322 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 KLHL15Q96M94 604 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 SAP130Q9H0E3 1048 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 CLEC4MQ9H2X3 399 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms