RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 ATP6V0D2Q8N8Y2 350 aa3.24□□□□□ -1.89
SSB-212ENST00000494051 ZNF540Q8NDQ6 660 aa3.24□□□□□ -1.89
SSB-212ENST00000494051 ST8SIA1Q92185 356 aa3.24□□□□□ -1.89
SSB-212ENST00000494051 SLC17A9Q9BYT1 436 aa3.24□□□□□ -1.89
SSB-212ENST00000494051 RHBGQ9H310 441 aa3.24□□□□□ -1.89
SSB-212ENST00000494051 SMYD3Q9H7B4 428 aa3.24□□□□□ -1.89
SSB-212ENST00000494051 C6orf203Q9P0P8 240 aaPredicted RBP3.24□□□□□ -1.89
SSB-212ENST00000494051 NUFIP1Q9UHK0 495 aaKnown RBP3.24□□□□□ -1.89
SSB-212ENST00000494051 ERVW-1Q9UQF0 538 aa3.24□□□□□ -1.89
SSB-212ENST00000494051 V9GY05 133 aa3.24□□□□□ -1.89
SSB-212ENST00000494051 PES1O00541 588 aaKnown RBP3.23□□□□□ -1.89
SSB-212ENST00000494051 HCRTR1O43613 425 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 LGI1O95970 557 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 FGF9P31371 208 aaPredicted RBP3.23□□□□□ -1.89
SSB-212ENST00000494051 HPCAL1P37235 193 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 KLK7P49862 253 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 HSPA2P54652 639 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 KRTAP10-1P60331 282 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 IL1RL1Q01638 556 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 GGTLC2Q14390 218 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 NSUN5P1Q3KNT7 163 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 KLF17Q5JT82 389 aaPredicted RBP3.23□□□□□ -1.89
SSB-212ENST00000494051 TSPO2Q5TGU0 170 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 RFLNAQ6ZTI6 216 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 ACOT1Q86TX2 421 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 LINC01551Q86U37 167 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 OR8H1Q8NGG4 311 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 BRSK1Q8TDC3 778 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 TMEM158Q8WZ71 300 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 HIST1H4GQ99525 98 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 ATP10DQ9P241 1426 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 GNG12Q9UBI6 72 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 ODF2LQ9ULJ1 636 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 GPRASP1Q5JY77 1395 aa3.23□□□□□ -1.89
SSB-212ENST00000494051 IGLV4-69A0A075B6H9 119 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 A0A087WZY1 265 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 A6NIZ1 184 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 NBR2O15453 112 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 RIPK2O43353 540 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 ZNF324O75467 553 aaPredicted RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 MOSP00540 346 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 CALCBP10092 127 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 ZNF44P15621 663 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 YWHABP31946 246 aaKnown RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 HNRNPA3P51991 378 aaKnown RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 AP3M2P53677 418 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 RAP1BP61224 184 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 SCGB2A2Q13296 93 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 MXD4Q14582 209 aaPredicted RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 INAQ16352 499 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 C1orf100Q5SVJ3 147 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 C6orf89Q6UWU4 347 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 COX15Q7KZN9 410 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 RALGPS2Q86X27 583 aaPredicted RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 H1FOOQ8IZA3 346 aaPredicted RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 OR51S1Q8NGJ8 323 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 FANK1Q8TC84 345 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 MRPS31Q92665 395 aaKnown RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 FAM210BQ96KR6 192 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 PELOQ9BRX2 385 aaKnown RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 SLC35A5Q9BS91 424 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 RWDD1Q9H446 243 aaPredicted RBP3.22□□□□□ -1.89
SSB-212ENST00000494051 AATFQ9NY61 560 aaKnown RBP eCLIP3.22□□□□□ -1.89
SSB-212ENST00000494051 PHF11Q9UIL8 331 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 TRAF3IP3Q9Y228 551 aa3.22□□□□□ -1.89
SSB-212ENST00000494051 TCP11X1B4DZS4 312 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 KRTAP4-16G5E9R7 235 aaPredicted RBP3.21□□□□□ -1.9
SSB-212ENST00000494051 RS1O15537 224 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 LRATO95237 230 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 WISP3O95389 354 aaPredicted RBP3.21□□□□□ -1.9
SSB-212ENST00000494051 H2BFMP0C1H6 154 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 CHTF8P0CG12 524 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 POLR2EP19388 210 aaKnown RBP3.21□□□□□ -1.9
SSB-212ENST00000494051 DAP3P51398 398 aaKnown RBP3.21□□□□□ -1.9
SSB-212ENST00000494051 C16orf72Q14CZ0 275 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 CCDC57Q2TAC2 916 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 TMEM41BQ5BJD5 291 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 C11orf71Q6IPW1 123 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 MFSD6LQ8IWD5 586 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 LRRC43Q8N309 656 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 DHRSXQ8N5I4 330 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 OR10A7Q8NGE5 316 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 OR6X1Q8NH79 312 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 SELENOIQ9C0D9 397 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 NUDT15Q9NV35 164 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 MFHAS1Q9Y4C4 1052 aa3.21□□□□□ -1.9
SSB-212ENST00000494051 IGKV1D-8A0A087WSZ0 117 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 IGHV3-64DA0A0J9YX35 117 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 A0A1B0GUS0 222 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 OR1F1O43749 312 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 ICAM2P13598 275 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 CRISP2P16562 243 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 MAGP20916 626 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 HTR2AP28223 471 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 KPNA2P52292 529 aaKnown RBP3.2□□□□□ -1.9
SSB-212ENST00000494051 CSTF1Q05048 431 aaKnown RBP3.2□□□□□ -1.9
SSB-212ENST00000494051 PJVKQ0ZLH3 352 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 MADCAM1Q13477 382 aa3.2□□□□□ -1.9
SSB-212ENST00000494051 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms