RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 NPTNQ9Y639 398 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 WRNQ14191 1432 aaPredicted RBP eCLIP4.72□□□□□ -1.65
SMC2-205ENST00000493955 ANKRD30BQ9BXX2 1392 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 CFAP65Q6ZU64 1925 aaKnown RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 IGHV3-35A0A0C4DH35 117 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 VSTM2BA6NLU5 285 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 ZNF705EA8MWA4 302 aaPredicted RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 KIF2AO00139 706 aaPredicted RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 CDX4O14627 284 aaPredicted RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 OR10H3O60404 316 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 HCN1O60741 890 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 ZNF354AO60765 605 aaPredicted RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 ERLIN1O75477 346 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 TBX6O95947 436 aaPredicted RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 TOP1P11387 765 aaKnown RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 SHC1P29353 583 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 EPHX2P34913 555 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 VEGFCP49767 419 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 SLC25A1P53007 311 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 RIPK4P57078 832 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 CXCL6P80162 114 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 ASAH1Q13510 395 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 KLHL38Q2WGJ6 581 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 TIMM50Q3ZCQ8 353 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 HIGD2BQ4VC39 106 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 C6orf226Q5I0X4 101 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 SLC22A10Q63ZE4 541 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 ATL3Q6DD88 541 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 OR5M10Q6IEU7 315 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 CCDC137Q6PK04 289 aaKnown RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 CDR2LQ86X02 465 aaPredicted RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 SLC2A14Q8TDB8 520 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 RASD2Q96D21 266 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 TIMD4Q96H15 378 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 CNOT6LQ96LI5 555 aaKnown RBP4.72□□□□□ -1.65
SMC2-205ENST00000493955 CCT8L2Q96SF2 557 aa4.72□□□□□ -1.65
SMC2-205ENST00000493955 SMIM28A0A1B0GU29 152 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 DHRS7CA6NNS2 312 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 GOLGA8SH3BPF8 625 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 PFKFB2O60825 505 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 ATP5LO75964 103 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 NDUFB10O96000 172 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 STSP08842 583 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 RNH1P13489 461 aaKnown RBP4.71□□□□□ -1.66
SMC2-205ENST00000493955 GNA11P29992 359 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 CCR1P32246 355 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 GCKP35557 465 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 QARSP47897 775 aaKnown RBP4.71□□□□□ -1.66
SMC2-205ENST00000493955 HNRNPA3P51991 378 aaKnown RBP4.71□□□□□ -1.66
SMC2-205ENST00000493955 CRYBB1P53674 252 aaPredicted RBP4.71□□□□□ -1.66
SMC2-205ENST00000493955 OGDHQ02218 1023 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 EIPR1Q53HC9 387 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 GSG1LQ6UXU4 331 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 H2BFWTQ7Z2G1 175 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 EGFL6Q8IUX8 553 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 UBE2E3Q969T4 207 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 ATOH8Q96SQ7 321 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 TRIM62Q9BVG3 475 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 SLITRK2Q9H156 845 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 OR1A1Q9P1Q5 309 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 ABCC2Q92887 1545 aa4.71□□□□□ -1.66
SMC2-205ENST00000493955 A0A087WWV3 80 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 A0A1B0GWB2 263 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 LGALS2P05162 132 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 COX5AP20674 150 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 RDXP35241 583 aaKnown RBP4.7□□□□□ -1.66
SMC2-205ENST00000493955 HLCSP50747 726 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 SLC10A7Q0GE19 358 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 PAN3Q58A45 887 aaKnown RBP4.7□□□□□ -1.66
SMC2-205ENST00000493955 DMRTC1Q5HYR2 192 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 RNLSQ5VYX0 342 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 UQCC3Q6UW78 93 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 UTS2BQ765I0 119 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 TRIM69Q86WT6 500 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 CADM2Q8N3J6 435 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 SVOPLQ8N434 492 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 ALLCQ8N6M5 410 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 MAGEE2Q8TD90 523 aaPredicted RBP4.7□□□□□ -1.66
SMC2-205ENST00000493955 GTSF1Q8WW33 167 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 NOL4LQ96MY1 436 aaPredicted RBP4.7□□□□□ -1.66
SMC2-205ENST00000493955 CLCC1Q96S66 551 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 GPR61Q9BZJ8 451 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 CHIAQ9BZP6 476 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 NHEJ1Q9H9Q4 299 aaPredicted RBP4.7□□□□□ -1.66
SMC2-205ENST00000493955 SPATA7Q9P0W8 599 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 COPS3Q9UNS2 423 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 CA5BQ9Y2D0 317 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 NSD2O96028 1365 aa4.7□□□□□ -1.66
SMC2-205ENST00000493955 ATP10AO60312 1499 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 MAP3K4Q9Y6R4 1608 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 E9PBE3 544 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 ZNF254O75437 659 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 LALBAP00709 142 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 HOXD10P28358 340 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 SLC8A3P57103 927 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 PLD1Q13393 1074 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 CCDC65Q8IXS2 484 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 BBS5Q8N3I7 341 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 OR2A12Q8NGT7 310 aa4.69□□□□□ -1.66
SMC2-205ENST00000493955 PAQR8Q8TEZ7 354 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms