RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PRKACGP22612 351 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 DNAJA1P31689 397 aaKnown RBP17.52■□□□□ 0.4
USP39-218ENST00000493829 LIMS1P48059 325 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 OTUD3Q5T2D3 398 aaPredicted RBP17.52■□□□□ 0.4
USP39-218ENST00000493829 SWT1Q5T5J6 900 aaKnown RBP17.52■□□□□ 0.4
USP39-218ENST00000493829 FAM109AQ8N4B1 249 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 TMEM239Q8WW34 195 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 SFXN2Q96NB2 322 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 OR2B2Q9GZK3 357 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 OR11A1Q9GZK7 315 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 PDP1Q9P0J1 537 aaPredicted RBP17.52■□□□□ 0.4
USP39-218ENST00000493829 SLC6A5Q9Y345 797 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 TPRP12270 2363 aaKnown RBP17.52■□□□□ 0.4
USP39-218ENST00000493829 USP24Q9UPU5 2620 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 A0A087WUJ7 227 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 A0A087WUU8 490 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 SH3PXD2BA1X283 911 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 OR10H3O60404 316 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 HTR3AP46098 478 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 ANKRD34AQ69YU3 496 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 TTC33Q6PID6 262 aaPredicted RBP17.52■□□□□ 0.39
USP39-218ENST00000493829 ADGRG3Q86Y34 549 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 NRMQ8IXM6 262 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 GTPBP8Q8N3Z3 284 aaPredicted RBP17.52■□□□□ 0.39
USP39-218ENST00000493829 OR4K5Q8NGD3 323 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 OR5K1Q8NHB7 308 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 PNPLA2Q96AD5 504 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 MPP4Q96JB8 637 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 FUZQ9BT04 418 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 CHRNA9Q9UGM1 479 aa17.52■□□□□ 0.39
USP39-218ENST00000493829 IGKV1D-42A0A075B6H8 117 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 ZC3H12DA2A288 527 aaKnown RBP17.51■□□□□ 0.39
USP39-218ENST00000493829 G3V2T6 193 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 EFNA2O43921 213 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 HPNP05981 417 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 SFTPDP35247 375 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 APOBEC1P41238 236 aaKnown RBP17.51■□□□□ 0.39
USP39-218ENST00000493829 EIF1P41567 113 aaKnown RBP17.51■□□□□ 0.39
USP39-218ENST00000493829 B3GALT5-AS1P59052 145 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 HYAL4Q2M3T9 481 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 SLC25A53Q5H9E4 307 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 SHQ1Q6PI26 577 aaKnown RBP17.51■□□□□ 0.39
USP39-218ENST00000493829 STK32CQ86UX6 486 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 OR10G2Q8NGC3 310 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 ACOT11Q8WXI4 607 aaPredicted RBP17.51■□□□□ 0.39
USP39-218ENST00000493829 EME1Q96AY2 570 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 SDCCAG3Q96C92 435 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 DTNBP1Q96EV8 351 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 PIGQQ9BRB3 760 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 ANKRD19PQ9H560 264 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 EXO5Q9H790 373 aa17.51■□□□□ 0.39
USP39-218ENST00000493829 ETV2O00321 342 aaPredicted RBP17.5■□□□□ 0.39
USP39-218ENST00000493829 TFPIP10646 304 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 ZNF17P17021 662 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 SHC1P29353 583 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 ARHGDIAP52565 204 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 ALDH6A1Q02252 535 aaKnown RBP17.5■□□□□ 0.39
USP39-218ENST00000493829 RRM2BQ7LG56 351 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 ZDHHC13Q8IUH4 622 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 Q8NA96 180 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 GIPC3Q8TF64 312 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 LDAHQ9H6V9 325 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 C20orf141Q9NUB4 165 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 KIF17Q9P2E2 1029 aa17.5■□□□□ 0.39
USP39-218ENST00000493829 C7orf72A4D263 438 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 POU2F1P14859 743 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 GPR4P46093 362 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 HMGA2P52926 109 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 CRYZQ08257 329 aaKnown RBP17.49■□□□□ 0.39
USP39-218ENST00000493829 MICAQ29983 383 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 TMEM44Q2T9K0 475 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 C3orf33Q6P1S2 294 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 LINC00114Q6XXX2 140 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 MBOAT2Q6ZWT7 520 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 SVOPLQ8N434 492 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 TEX19Q8NA77 164 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 AQP11Q8NBQ7 271 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 NRG4Q8WWG1 115 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 FAM46AQ96IP4 442 aaKnown RBP17.49■□□□□ 0.39
USP39-218ENST00000493829 SLC25A18Q9H1K4 315 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 C12orf10Q9HB07 376 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 MEPEQ9NQ76 525 aaPredicted RBP17.49■□□□□ 0.39
USP39-218ENST00000493829 SERINC1Q9NRX5 453 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 STOML1Q9UBI4 398 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 TNFRSF10DQ9UBN6 386 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 MED31Q9Y3C7 131 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 ZNF337Q9Y3M9 751 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 FREM3P0C091 2139 aa17.49■□□□□ 0.39
USP39-218ENST00000493829 ENO4A6NNW6 628 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 LRRN3E7EW58 273 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 NPIPA5E9PKD4 350 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 ERVH48-1M5A8F1 160 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 WISP2O76076 250 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 IFI30P13284 250 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 CBLP22681 906 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 RBM34P42696 430 aaKnown RBP17.48■□□□□ 0.39
USP39-218ENST00000493829 RPS5P46782 204 aaKnown RBP17.48■□□□□ 0.39
USP39-218ENST00000493829 STARP49675 285 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 DLX5P56178 289 aa17.48■□□□□ 0.39
USP39-218ENST00000493829 EGR4Q05215 589 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms