RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 NT5EP21589 574 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 TEAD1P28347 426 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 PTGFRP43088 359 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 CBFBQ13951 182 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM69Q5SWH9 247 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 PRSS55Q6UWB4 352 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 HSD11B1LQ7Z5J1 315 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 RXFP4Q8TDU9 374 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 PEX11GQ96HA9 241 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 DPH1Q9BZG8 443 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 ZCCHC2Q9C0B9 1178 aaKnown RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.82□□□□□ -0.682e-6■■■■■ 26.8
HDAC4-210ENST00000493582 OR52D1Q9H346 318 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 ANKRD10Q9NXR5 420 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 PCDHB10Q9UN67 800 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 VWA8A3KMH1 1905 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 HMGN2P05204 90 aaKnown RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 RPL17P18621 184 aaKnown RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 CD53P19397 219 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 RORAP35398 523 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 IL10RAQ13651 578 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 CCDC157Q569K6 752 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 RTN4RL1Q86UN2 441 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 SERINC5Q86VE9 423 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 TEX19Q8NA77 164 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 CAMK1GQ96NX5 476 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 SLC22A12Q96S37 553 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 PDCD10Q9BUL8 212 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 RIOK2Q9BVS4 552 aaKnown RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 CHST6Q9GZX3 395 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 GLIPR2Q9H4G4 154 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 POT1Q9NUX5 634 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 WSB2Q9NYS7 404 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 MEX3AA1L020 520 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 PPM1DO15297 605 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 TMPRSS11DO60235 418 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 SLC25A12O75746 678 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 FGBP02675 491 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 SBK2P0C263 348 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 MGMTP16455 207 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 MAPK8P45983 427 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 FXYD6P3P58550 94 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 SRSF3P84103 164 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 ZNF750Q32MQ0 723 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 OR2W3Q7Z3T1 314 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 GDF7Q7Z4P5 450 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 ARL14Q8N4G2 192 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 OR6S1Q8NH40 331 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 SUN3Q8TAQ9 357 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 SYNPRQ8TBG9 265 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 ING5Q8WYH8 240 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 GFI1Q99684 422 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 KLF16Q9BXK1 252 aaPredicted RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 TLNRD1Q9H1K6 362 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 SPG21Q9NZD8 308 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 MYEF2Q9P2K5 600 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 ST6GALNAC2Q9UJ37 374 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 SLC5A10A0PJK1 596 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 KLF4O43474 513 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 EIF1BO60739 113 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 ARL6IP5O75915 188 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 DDNO94850 711 aaPredicted RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 IFNA4P05014 189 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 BDKRB2P30411 391 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 CD70P32970 193 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 BSGP35613 385 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 EIF1P41567 113 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 AGERQ15109 404 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 AVPI1Q5T686 147 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 OLFML2AQ68BL7 652 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 TAS1R1Q7RTX1 841 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 KLHDC8AQ8IYD2 350 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 CHST14Q8NCH0 376 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 WDR34Q96EX3 536 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 PINK1Q9BXM7 581 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 C14orf105Q9NVL8 296 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 DHCR7Q9UBM7 475 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 PLAGL1Q9UM63 463 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 TRAV14DV4A0A0A6YYC5 116 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 ACOD1A6NK06 481 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 PAK4O96013 591 aaPredicted RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 CLTBP09497 229 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 TMIGD3P0DMS9 266 aaPredicted RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 CDK2P24941 298 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 NFYBP25208 207 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 TAS2R43P59537 309 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 RPS11P62280 158 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 BLOC1S1P78537 153 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM220Q6QAJ8 160 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 SPAG16Q8N0X2 631 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 S100A16Q96FQ6 103 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 MRPL48Q96GC5 212 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 MCHR1Q99705 422 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 UTP23Q9BRU9 249 aaKnown RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 PTDSS2Q9BVG9 487 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 ZNF471Q9BX82 626 aaPredicted RBP10.81□□□□□ -0.68
HDAC4-210ENST00000493582 ADGRL4Q9HBW9 690 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 BCL2L10Q9HD36 194 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 NOX4Q9NPH5 578 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms