RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ALG10BQ5I7T1 473 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 CDCP2Q5VXM1 449 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 WBP2NLQ6ICG8 309 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 ARHGAP11AQ6P4F7 1023 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 C19orf48Q6RUI8 117 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 SMARCD3Q6STE5 483 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 C5orf46Q6UWT4 87 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 TMPRSS11AQ6ZMR5 421 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 OLIG3Q7RTU3 272 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 KANSL1Q7Z3B3 1105 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 ARHGAP22Q7Z5H3 698 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 KIF18BQ86Y91 864 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 C1orf210Q8IVY1 113 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 SLC34A3Q8N130 599 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 NANOGP1Q8N7R0 232 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 POGLUT1Q8NBL1 392 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 TBC1D15Q8TC07 691 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 TMEM255BQ8WV15 326 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 METTL21AQ8WXB1 218 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 CNOT9Q92600 299 aaKnown RBP9.2□□□□□ -0.94
PRPF3-206ENST00000493553 PIGKQ92643 395 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 DACH2Q96NX9 599 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 PRSS27Q9BQR3 290 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 TMEM43Q9BTV4 400 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF426Q9BUY5 554 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 UBQLN3Q9H347 655 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 CAPN10Q9HC96 672 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 CTPS2Q9NRF8 586 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 CMC2Q9NRP2 79 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 DNAJC27Q9NZQ0 273 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 CNIH4Q9P003 139 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 CCDC59Q9P031 241 aaKnown RBP9.2□□□□□ -0.94
PRPF3-206ENST00000493553 C19orf25Q9UFG5 118 aaPredicted RBP9.2□□□□□ -0.94
PRPF3-206ENST00000493553 MUTYHQ9UIF7 546 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 DUSP13Q9UII6 198 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 KLHL21Q9UJP4 597 aa9.2□□□□□ -0.94
PRPF3-206ENST00000493553 TDRD6O60522 2096 aaKnown RBP9.2□□□□□ -0.94
PRPF3-206ENST00000493553 SEC16AO15027 2179 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF503-AS2A6NEH8 195 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 CLDN25C9JDP6 229 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 CDC123O75794 336 aaPredicted RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 NDUFB2O95178 105 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 LYPD3O95274 346 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 NADKO95544 446 aaPredicted RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 CFIP05156 583 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 SAGP10523 405 aaPredicted RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 PEPDP12955 493 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 FOLR1P15328 257 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF12P17014 697 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF3P17036 446 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 NAGAP17050 411 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 CD53P19397 219 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 HTR2AP28223 471 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 IL12BP29460 328 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 CSF2RBP32927 897 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ATP6V1E1P36543 226 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 TGFBR2P37173 567 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ACAA2P42765 397 aaKnown RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 RFX3P48380 749 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 PNLIPRP2P54317 469 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 CDH11P55287 796 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 WNT4P56705 351 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ACTC1P68032 377 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ACTA1P68133 377 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 DCDP81605 110 aaKnown RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 BDH1Q02338 343 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 CSTF1Q05048 431 aaKnown RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 FOXD4Q12950 439 aaPredicted RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 GPR50Q13585 617 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF528Q3MIS6 628 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 AADACL4Q5VUY2 407 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 ACSM5Q6NUN0 579 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 NPSR1Q6W5P4 371 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 DGAT2L6Q6ZPD8 337 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 HMGN2P46Q86SG4 172 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 SLCO6A1Q86UG4 719 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 NLGN4XQ8N0W4 816 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 SIMC1Q8NDZ2 872 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 FAM71CQ8NEG0 241 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 OR52I1Q8NGK6 324 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 OR5L2Q8NGL0 311 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 OR1N1Q8NGS0 311 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 OR8K3Q8NH51 312 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 OR52N1Q8NH53 320 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 DYNC2LI1Q8TCX1 351 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 SGTBQ96EQ0 304 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 RNFT2Q96EX2 444 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 GPA33Q99795 319 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 OR8D2Q9GZM6 311 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 LAT2Q9GZY6 243 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 NAA50Q9GZZ1 169 aaKnown RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 DCSTAMPQ9H295 470 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 OR52D1Q9H346 318 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 LRRN3Q9H3W5 708 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 LIN28AQ9H9Z2 209 aaKnown RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 FBXO8Q9NRD0 319 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 AKAP7Q9P0M2 348 aaPredicted RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 CRNNQ9UBG3 495 aaPredicted RBP9.19□□□□□ -0.94
PRPF3-206ENST00000493553 AASSQ9UDR5 926 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 KCNE5Q9UJ90 142 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms