RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 COL6A6A6NMZ7 2263 aa10.43□□□□□ -0.74
LSM2-214ENST00000493387 ZFHX4Q86UP3 3567 aa10.43□□□□□ -0.74
LSM2-214ENST00000493387 FREM3P0C091 2139 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 A0A1B0GTH9 108 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 TMEM72A0PK05 275 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 SHISA8B8ZZ34 492 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 ANKRD65E5RJM6 399 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 H3BML4 177 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 J3KTA2 159 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 GNGT2O14610 69 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 FFAR1O14842 300 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 OR2T1O43869 369 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 SEMA7AO75326 666 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 PRSS23O95084 383 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 GADD45GO95257 159 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 LYPD3O95274 346 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 CST1P01037 141 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 TFPIP10646 304 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 CPN1P15169 458 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 FASP25445 335 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 PTGS2P35354 604 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 ERFP50548 548 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 HMGA2P52926 109 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 RPS3AP61247 264 aaKnown RBP10.42□□□□□ -0.74
LSM2-214ENST00000493387 FOXK1P85037 733 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 SPIBQ01892 262 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 CRYZQ08257 329 aaKnown RBP10.42□□□□□ -0.74
LSM2-214ENST00000493387 TMEM176BQ3YBM2 270 aaPredicted RBP10.42□□□□□ -0.74
LSM2-214ENST00000493387 SYT14P1Q58G82 188 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 WLSQ5T9L3 541 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 POMZP3Q6PJE2 187 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 GFRALQ6UXV0 394 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 LINC00114Q6XXX2 140 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 ESPNLQ6ZVH7 1005 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 CHMP1BQ7LBR1 199 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 RRM2BQ7LG56 351 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 ZNF605Q86T29 641 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 RNF113BQ8IZP6 322 aaKnown RBP10.42□□□□□ -0.74
LSM2-214ENST00000493387 LINC00471Q8N535 108 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 ST6GALNAC3Q8NDV1 305 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 SLCO4A1Q96BD0 722 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 KLHL15Q96M94 604 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 TIMP4Q99727 224 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 KLHL4Q9C0H6 718 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 REEP1Q9H902 201 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 KRCC1Q9NPI7 259 aaPredicted RBP10.42□□□□□ -0.74
LSM2-214ENST00000493387 TIGARQ9NQ88 270 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 DNAJB9Q9UBS3 223 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 TMCC3Q9ULS5 477 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 DNAJC13O75165 2243 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 PIEZO2Q9H5I5 2752 aa10.42□□□□□ -0.74
LSM2-214ENST00000493387 TRAV36DV7A0A075B6V5 113 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 AHRRA9YTQ3 701 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 B8ZZF3 427 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 H0YHG0 523 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 TNFRSF11BO00300 401 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 EFNA2O43921 213 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 ENTPD5O75356 428 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 DIRAS1O95057 198 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 AHSA1O95433 338 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 LDLRP01130 860 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 IGF2P01344 180 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 THY1P04216 161 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 HOXD4P09016 255 aaPredicted RBP10.41□□□□□ -0.74
LSM2-214ENST00000493387 ZNF708P17019 499 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 CCNA2P20248 432 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 RRM2P31350 389 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 PTGER4P35408 488 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 IFNGR2P38484 337 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 LHX2P50458 406 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 MLLT10P55197 1068 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 CSNK2A1P68400 391 aaPredicted RBP10.41□□□□□ -0.74
LSM2-214ENST00000493387 MFSD13AQ14CX5 517 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 PRR30Q53SZ7 412 aaPredicted RBP10.41□□□□□ -0.74
LSM2-214ENST00000493387 DCST1Q5T197 706 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 TSPYL5Q86VY4 417 aaPredicted RBP10.41□□□□□ -0.74
LSM2-214ENST00000493387 ATP6V1C2Q8NEY4 427 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 OR6S1Q8NH40 331 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 TMEM239Q8WW34 195 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 PYDC1Q8WXC3 89 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 ACOT11Q8WXI4 607 aaPredicted RBP10.41□□□□□ -0.74
LSM2-214ENST00000493387 SMPDL3BQ92485 455 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 WDYHV1Q96HA8 205 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 MS4A3Q96HJ5 214 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 NPAS1Q99742 590 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 PRSS27Q9BQR3 290 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 BDH2Q9BUT1 245 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 ZNF426Q9BUY5 554 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 PRDM14Q9GZV8 571 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 S100A14Q9HCY8 104 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 SPRR3Q9UBC9 169 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 RHCGQ9UBD6 479 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 TRAPPC4Q9Y296 219 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 MED31Q9Y3C7 131 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 TESMINQ9Y4I5 508 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 ZNF407Q9C0G0 2248 aa10.41□□□□□ -0.74
LSM2-214ENST00000493387 ATRXP46100 2492 aa10.4□□□□□ -0.74
LSM2-214ENST00000493387 SVILO95425 2214 aa10.4□□□□□ -0.74
LSM2-214ENST00000493387 NPIPA2E9PIF3 369 aa10.4□□□□□ -0.74
LSM2-214ENST00000493387 NPIPA3F8WFD2 350 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms