RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
MSH6-208ENST00000493177 TMEM251Q8N6I4 163 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 OR2T29Q8NH02 315 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 OR52J3Q8NH60 311 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 OR14L1PQ8NHC6 308 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 PHF10Q8WUB8 498 aaKnown RBP12.14□□□□□ -0.47
MSH6-208ENST00000493177 LRTOMTQ8WZ04 291 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 ST8SIA1Q92185 356 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 ACER3Q9NUN7 267 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 COQ3Q9NZJ6 369 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 RIMS3Q9UJD0 308 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 SLC7A7Q9UM01 511 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 RPH3AQ9Y2J0 694 aaPredicted RBP12.14□□□□□ -0.47
MSH6-208ENST00000493177 MEMO1Q9Y316 297 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 A0A0B4J2E0 115 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 A0A1B0GX12 115 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 NPIPA3F8WFD2 350 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 TNFRSF11BO00300 401 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 ADAMDEC1O15204 470 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 CLOCKO15516 846 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 DEAF1O75398 565 aaPredicted RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 GLSO94925 669 aaPredicted RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 GADD45GO95257 159 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 H1F0P07305 194 aaKnown RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 PRKCAP17252 672 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 TACR3P29371 465 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 POLR2HP52434 150 aaKnown RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 SMIM11AP58511 58 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 TRAM2Q15035 370 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 PLPPR5Q32ZL2 321 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 IQCCQ4KMZ1 466 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 FGD3Q5JSP0 725 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 ULK3Q6PHR2 472 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 XKRXQ6PP77 449 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 GRINAQ7Z429 371 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 GDF7Q7Z4P5 450 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 AMIGO2Q86SJ2 522 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 TSPYL5Q86VY4 417 aaPredicted RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 DOLPP1Q86YN1 238 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 OFCC1Q8IZS5 231 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 LSMEM1Q8N8F7 131 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 OR5M1Q8NGP8 315 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 DNAJA4Q8WW22 397 aaPredicted RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 ITLN2Q8WWU7 325 aaPredicted RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 ZBTB8AQ96BR9 441 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 C3orf49Q96BT1 292 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 PKP2Q99959 881 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 TP63Q9H3D4 680 aaPredicted RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 ZNF703Q9H7S9 590 aaPredicted RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 REEP1Q9H902 201 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 DNAJB9Q9UBS3 223 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 ASH1LQ9NR48 2969 aaKnown RBP12.13□□□□□ -0.47
MSH6-208ENST00000493177 NCKAP5O14513 1909 aa12.13□□□□□ -0.47
MSH6-208ENST00000493177 HEATR5AQ86XA9 2040 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 ELOA3DA6NLF2 546 aaPredicted RBP12.12□□□□□ -0.47
MSH6-208ENST00000493177 E9PLN8 166 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 FFAR1O14842 300 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 CHP2O43745 196 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 E2F6O75461 281 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 PTNP21246 168 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 CXCR1P25024 350 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 EIF1P41567 113 aaKnown RBP12.12□□□□□ -0.47
MSH6-208ENST00000493177 HTR3AP46098 478 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 PPP1R8Q12972 351 aaKnown RBP12.12□□□□□ -0.47
MSH6-208ENST00000493177 SLC10A1Q14973 349 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 ATP6AP1Q15904 470 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 ELOA3BQ3SY89 546 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 WIPI1Q5MNZ9 446 aaPredicted RBP12.12□□□□□ -0.47
MSH6-208ENST00000493177 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 ZNF585AQ6P3V2 769 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 NCCRP1Q6ZVX7 275 aaPredicted RBP12.12□□□□□ -0.47
MSH6-208ENST00000493177 PIK3C3Q8NEB9 887 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 FAM83FQ8NEG4 500 aaPredicted RBP12.12□□□□□ -0.47
MSH6-208ENST00000493177 ATP6V1C2Q8NEY4 427 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 ELOA3Q8NG57 546 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 ZNF524Q96C55 264 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 MRGPRX4Q96LA9 322 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 SFXN2Q96NB2 322 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 VKORC1Q9BQB6 163 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 BDH2Q9BUT1 245 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 OR2B2Q9GZK3 357 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 SEMA6AQ9H2E6 1030 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 UBQLN3Q9H347 655 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 NMNAT1Q9HAN9 279 aaPredicted RBP12.12□□□□□ -0.47
MSH6-208ENST00000493177 TMCC3Q9ULS5 477 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 SAMHD1Q9Y3Z3 626 aaKnown RBP12.12□□□□□ -0.47
MSH6-208ENST00000493177 U3KQV3 271 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 POLEQ07864 2286 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 PTPN13Q12923 2485 aa12.12□□□□□ -0.47
MSH6-208ENST00000493177 TMED7-TICAM2A0A0A6YYA0 188 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 BCKDKO14874 412 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 ZIC3O60481 467 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 PRSS23O95084 383 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 CLDN14O95500 239 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 THY1P04216 161 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 HPNP05981 417 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 THRBP10828 461 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms