RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 KLRF1Q9NZS2 232 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 ABI3Q9P2A4 366 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 TP53TG5Q9Y2B4 290 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 NTNG1Q9Y2I2 539 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 WIF1Q9Y5W5 379 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 CACNA1BQ00975 2339 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 CFAP46Q8IYW2 2715 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 IGLV3-32A0A0A0MS00 114 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 LRRC3CA6NJW4 275 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 SYT5O00445 386 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 NME2P1O60361 137 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 CSTAP01040 98 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 C8BP07358 591 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 RFPL3SP0C7P2 107 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 CNR1P21554 472 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 NME2P22392 152 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 MST1P26927 711 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 DIO1P49895 249 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 VLDLRP98155 873 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 KCNAB2Q13303 367 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 TOMM34Q15785 309 aaPredicted RBP8.53□□□□□ -1.04
CSTF1-206ENST00000493039 RAB12Q6IQ22 244 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 SLC30A6Q6NXT4 461 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 Q6ZS92 163 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 GALNTL5Q7Z4T8 443 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 CMIPQ8IY22 773 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 ZNF527Q8NB42 609 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 SLC26A7Q8TE54 656 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
CSTF1-206ENST00000493039 SH3YL1Q96HL8 342 aaPredicted RBP8.53□□□□□ -1.04
CSTF1-206ENST00000493039 GNRHR2Q96P88 292 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 RAB3IPQ96QF0 476 aaPredicted RBP8.53□□□□□ -1.04
CSTF1-206ENST00000493039 NPAS1Q99742 590 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 ARHGDIGQ99819 225 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
CSTF1-206ENST00000493039 OSBPL11Q9BXB4 747 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.53□□□□□ -1.04
CSTF1-206ENST00000493039 SACM1LQ9NTJ5 587 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 ARMC1Q9NVT9 282 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 MED11Q9P086 117 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 FBXL2Q9UKC9 423 aa8.53□□□□□ -1.04
CSTF1-206ENST00000493039 HEATR5AQ86XA9 2040 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 AP3D1O14617 1153 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 ZNF264O43296 627 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 GMNNO75496 209 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 WISP2O76076 250 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 CASRP41180 1078 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 GDI2P50395 445 aaKnown RBP8.52□□□□□ -1.05
CSTF1-206ENST00000493039 ZNF766Q5HY98 468 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 RNFT1Q5M7Z0 435 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 SEZ6L2Q6UXD5 910 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 FADS6Q8N9I5 356 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 OR2M7Q8NG81 312 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 TEX47Q8TBZ9 253 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 TMEM68Q96MH6 324 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 SEPHS2Q99611 448 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 AMBRA1Q9C0C7 1298 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.52□□□□□ -1.05
CSTF1-206ENST00000493039 TIMMDC1Q9NPL8 285 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 ZNF71Q9NQZ8 489 aaPredicted RBP8.52□□□□□ -1.05
CSTF1-206ENST00000493039 FAIMQ9NVQ4 179 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 ADPRHL2Q9NX46 363 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 RPS6KA6Q9UK32 745 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 SAMD4AQ9UPU9 718 aaKnown RBP8.52□□□□□ -1.05
CSTF1-206ENST00000493039 FFAR1O14842 300 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 HCRTR2O43614 444 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 GMFGO60234 142 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 MT-ND1P03886 318 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 THY1P04216 161 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 P04436 131 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 HTR2AP28223 471 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 RFC3P40938 356 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 HTR2BP41595 481 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 PPP2R2BQ00005 443 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 C17orf67Q0P5P2 114 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 PLEKHN1Q494U1 663 aaPredicted RBP8.52□□□□□ -1.05
CSTF1-206ENST00000493039 MTX3Q5HYI7 312 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 FAM209BQ5JX69 171 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 TIGD3Q6B0B8 471 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 ARSKQ6UWY0 536 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 CARM1Q86X55 608 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 ANGPTL6Q8NI99 470 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 FANK1Q8TC84 345 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 GPR119Q8TDV5 335 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 RASSF5Q8WWW0 418 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 ABTB1Q969K4 478 aaPredicted RBP8.52□□□□□ -1.05
CSTF1-206ENST00000493039 DUS3LQ96G46 650 aaKnown RBP8.52□□□□□ -1.05
CSTF1-206ENST00000493039 TMEM41AQ96HV5 264 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 MFRPQ9BY79 579 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 LAT2Q9GZY6 243 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 UBQLN3Q9H347 655 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 CCM2LQ9NUG4 571 aaPredicted RBP8.52□□□□□ -1.05
CSTF1-206ENST00000493039 NDUFAF4Q9P032 175 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 KCNN3Q9UGI6 736 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 SLC35A3Q9Y2D2 325 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 PCDHGB6Q9Y5F9 930 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 PCDHGB5Q9Y5G0 923 aa8.52□□□□□ -1.05
CSTF1-206ENST00000493039 DHRS12A0PJE2 317 aa8.51□□□□□ -1.05
CSTF1-206ENST00000493039 J3KTA2 159 aa8.51□□□□□ -1.05
CSTF1-206ENST00000493039 GTPBP1O00178 669 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms