RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 DERL2Q9GZP9 239 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 OR51B5Q9H339 312 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 PIGMQ9H3S5 423 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 UBTD1Q9HAC8 227 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 NMRAL1Q9HBL8 299 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 SNX15Q9NRS6 342 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 MS4A12Q9NXJ0 267 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 USE1Q9NZ43 259 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 OSGIN1Q9UJX0 560 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 PACSIN3Q9UKS6 424 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 OAZ3Q9UMX2 235 aa11.87□□□□□ -0.51
HDAC3-213ENST00000492506 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 PLPP1O14494 284 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 GNB5O14775 395 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 SLITRK5O94991 958 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 PAX1P15863 534 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 CRYGSP22914 178 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 PTGDSP41222 190 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 PTH2RP49190 550 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 RAB25P57735 213 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 IRF8Q02556 426 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 PCDH1Q08174 1060 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 TRAF3Q13114 568 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 OR4D1Q15615 310 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 MAPK11Q15759 364 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 ZNF404Q494X3 552 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 SYT6Q5T7P8 510 aaPredicted RBP11.86□□□□□ -0.51
HDAC3-213ENST00000492506 UBE2UQ5VVX9 321 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 HIST2H2AA3Q6FI13 130 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 DESI1Q6ICB0 168 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 SULT1C3Q6IMI6 304 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 MRM1Q6IN84 353 aaKnown RBP11.86□□□□□ -0.51
HDAC3-213ENST00000492506 C20orf204Q6ZNR8 217 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 SPATA6LQ8N4H0 392 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 OR7G3Q8NG95 312 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 LRRC20Q8TCA0 184 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 ZFAND1Q8TCF1 268 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 HTRA1Q92743 480 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 UCN3Q969E3 161 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 PIK3IP1Q96FE7 263 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 CMTM7Q96FZ5 175 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 METTL2AQ96IZ6 378 aaKnown RBP11.86□□□□□ -0.51
HDAC3-213ENST00000492506 ZNF300Q96RE9 604 aaPredicted RBP11.86□□□□□ -0.51
HDAC3-213ENST00000492506 RBBP8Q99708 897 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 ZNF556Q9HAH1 456 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 POPDC3Q9HBV1 291 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 ABCB10Q9NRK6 738 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 KLHL28Q9NXS3 571 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 PHF11Q9UIL8 331 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 AURKCQ9UQB9 309 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 TRAPPC4Q9Y296 219 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 NOSIPQ9Y314 301 aaKnown RBP11.86□□□□□ -0.51
HDAC3-213ENST00000492506 ASB4Q9Y574 426 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 PCNX3Q9H6A9 2034 aa11.86□□□□□ -0.51
HDAC3-213ENST00000492506 A0A1W2PR48 441 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 GLOD5A6NK44 160 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 STX16-NPEPL1H3BU86 382 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 MSTNO14793 375 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 UBDO15205 165 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 OR10H2O60403 315 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 UGT2B17O75795 530 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 PIAS1O75925 651 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 PRKD3O94806 890 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 TGM6O95932 706 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 CT62P0C5K7 136 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 SLC35E2BP0CK96 405 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 SLC35E2P0CK97 266 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 ATP6V1B2P21281 511 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 ABCD3P28288 659 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 CCKARP32238 428 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 RYKP34925 604 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 SLC7A2P52569 658 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 UGT2B15P54855 530 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 GFRA1P56159 465 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 EEFSECP57772 596 aaKnown RBP11.85□□□□□ -0.51
HDAC3-213ENST00000492506 CSNK2BP67870 215 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDAC3-213ENST00000492506 FUT7Q11130 342 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 GAB1Q13480 694 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 TMEM81Q6P7N7 255 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 ANGPTL8Q6UXH0 198 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 C22orf34Q6ZV56 151 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 R3HCC1LQ7Z5L2 792 aaKnown RBP11.85□□□□□ -0.51
HDAC3-213ENST00000492506 BTLAQ7Z6A9 289 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 GPSM1Q86YR5 675 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 PHC2Q8IXK0 858 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 PRR22Q8IZ63 422 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 TCTE3Q8IZS6 198 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 RNF148Q8N7C7 305 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 OR1J4Q8NGS1 313 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 OR10Z1Q8NGY1 313 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 RGMAQ96B86 450 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 STARD4Q96DR4 205 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 TRMOQ9BU70 441 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 SLIRPQ9GZT3 109 aaKnown RBP11.85□□□□□ -0.51
HDAC3-213ENST00000492506 NXF2Q9GZY0 626 aaKnown RBP11.85□□□□□ -0.51
HDAC3-213ENST00000492506 PCDHAC1Q9H158 963 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 MEAF6Q9HAF1 191 aa11.85□□□□□ -0.51
HDAC3-213ENST00000492506 MRPL39Q9NYK5 338 aaKnown RBP11.85□□□□□ -0.51
HDAC3-213ENST00000492506 ATP6V1HQ9UI12 483 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms