RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ATP6AP1LQ52LC2 224 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 XKR7Q5GH72 579 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 TIMM23BQ5SRD1 257 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 CCNJQ5T5M9 372 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 C3orf33Q6P1S2 294 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 TMEM53Q6P2H8 277 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 CBLN3Q6UW01 205 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 CXXC5Q7LFL8 322 aaKnown RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 NUFIP2Q7Z417 695 aaKnown RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 DTX2Q86UW9 622 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 DDIASQ8IXT1 998 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 RIBC1Q8N443 379 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 BANPQ8N9N5 519 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 RAB3IL1Q8TBN0 382 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 SLC25A43Q8WUT9 341 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 TWIST2Q8WVJ9 160 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 TMEM234Q8WY98 164 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 JADE3Q92613 823 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 SGK3Q96BR1 496 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 MUCL1Q96DR8 90 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 MDFIQ99750 246 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 PSD2Q9BQI7 771 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 SRXN1Q9BYN0 137 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 REG4Q9BYZ8 158 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 TRIM2Q9C040 744 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 BHLHE41Q9C0J9 482 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-212ENST00000492407 LAT2Q9GZY6 243 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 TMEM185BQ9H7F4 350 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 COQ10BQ9H8M1 238 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 POLE3Q9NRF9 147 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 SERINC1Q9NRX5 453 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 GPATCH2Q9NW75 528 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 JMJD1CQ15652 2540 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 ARID1AO14497 2285 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 ZANQ9Y493 2812 aa8.1□□□□□ -1.11
HDAC3-212ENST00000492407 IGKV3D-15A0A087WSY6 115 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 A0A1W2PP18 115 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 DPRXA6NFQ7 191 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SERINC4A6NH21 518 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF814B7Z6K7 855 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 PIP5K1BO14986 540 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 ANKRD28O15084 1053 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 CD5LO43866 347 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 STX11O75558 287 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 IFNA2P01563 188 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 TP53P04637 393 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SOD3P08294 240 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 COX5AP20674 150 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SHC1P29353 583 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 ATP6V1E1P36543 226 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 MAP2K6P52564 334 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 DSCR9P59020 149 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 KRTAP1-1Q07627 177 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 RASGEF1BQ0VAM2 473 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 QPRTQ15274 297 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF141Q15928 474 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SPDYE7PQ495Y7 208 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 GALNTL6Q49A17 601 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 C6orf136Q5SQH8 315 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SEZ6L2Q6UXD5 910 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 BHLHA15Q7RTS1 189 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-212ENST00000492407 GALNT5Q7Z7M9 940 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 NKAIN4Q8IVV8 208 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 RIMKLAQ8IXN7 391 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SCAIQ8N9R8 606 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 OR7A2PQ8NGA2 310 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 CLHC1Q8NHS4 586 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 FBXO30Q8TB52 745 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 CHMP6Q96FZ7 201 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 APOPT1Q96IL0 206 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SDF2Q99470 211 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SLCO5A1Q9H2Y9 848 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 CXorf36Q9H7Y0 433 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 ASIC5Q9NY37 505 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 ING1Q9UK53 422 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-212ENST00000492407 MGAT4BQ9UQ53 548 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 LIPT1Q9Y234 373 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 PTGDR2Q9Y5Y4 395 aa8.09□□□□□ -1.11
HDAC3-212ENST00000492407 SPIN1Q9Y657 262 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-212ENST00000492407 A6NHS1 94 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 GPR171O14626 319 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 SMAD9O15198 467 aaKnown RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 CLOCKO15516 846 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 PEX11AO75192 247 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 SLU7O95391 586 aaKnown RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 SHBGP04278 402 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 NUDT17P0C025 328 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 GGT1P19440 569 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 PGCP20142 388 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 ALDH3A1P30838 453 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 APOBEC1P41238 236 aaKnown RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 CLDN8P56748 225 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 SSTP61278 116 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 TXNL4AP83876 142 aaKnown RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 EMX2Q04743 252 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 BSPH1Q075Z2 132 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 IFFO1Q0D2I5 559 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 VEZF1Q14119 521 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 PPA1Q15181 289 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms