RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 WACQ9BTA9 647 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 TWSG1Q9GZX9 223 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 NEK6Q9HC98 313 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 PLSCR3Q9NRY6 295 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 BABAM2Q9NXR7 383 aa11.45□□□□□ -0.58
HMGN1-220ENST00000492280 IRGMA1A4Y4 181 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 H7C1C5 153 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 LANCL1O43813 399 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 WISP1O95388 367 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 SBK2P0C263 348 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 CT45A8P0DMV1 189 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 CT45A9P0DMV2 189 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 TCEA1P23193 301 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 RPS27P42677 84 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 LCN6P62502 163 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 CD83Q01151 205 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 CD226Q15762 336 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 CT45A2Q5DJT8 189 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 ASB18Q6ZVZ8 466 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 ARHGEF39Q8N4T4 335 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 OR6K6Q8NGW6 343 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 OR52N1Q8NH53 320 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 TSLPQ969D9 159 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 GFM1Q96RP9 751 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 ORAI3Q9BRQ5 295 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 TP63Q9H3D4 680 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 PRTFDC1Q9NRG1 225 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 MED17Q9NVC6 651 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 NLKQ9UBE8 527 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 DHCR7Q9UBM7 475 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 HS3ST3A1Q9Y663 406 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 B4DXG7 233 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 SELENOFO60613 162 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 RCBTB2O95199 551 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 CSTAP01040 98 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 DRD5P21918 477 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 ALAS2P22557 587 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 RPL4P36578 427 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 IFITM2Q01629 132 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 ZNHIT3Q15649 155 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 TRIQKQ629K1 86 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 XKRXQ6PP77 449 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 TMPRSS11FQ6ZWK6 438 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 GID4Q8IVV7 300 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 CHAC2Q8WUX2 184 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 DGAT2Q96PD7 388 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 RANGRFQ9HD47 186 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 EXTL2Q9UBQ6 330 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 N6AMT1Q9Y5N5 214 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 RGS9O75916 674 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 EIF4EP06730 217 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 RNH1P13489 461 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 ERVK-25P63136 954 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 SFSWAPQ12872 951 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 TMEM53Q6P2H8 277 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 CEACAM19Q7Z692 300 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 BCORP1Q8N888 145 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 SAMD12Q8N8I0 201 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 OR4D9Q8NGE8 314 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 ENKURQ8TC29 256 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 PDCD1LG2Q9BQ51 273 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 MESP1Q9BRJ9 268 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 PNO1Q9NRX1 252 aaKnown RBP11.44□□□□□ -0.58
HMGN1-220ENST00000492280 UCKL1Q9NWZ5 548 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 RASD1Q9Y272 281 aa11.44□□□□□ -0.58
HMGN1-220ENST00000492280 MN1Q10571 1320 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-220ENST00000492280 A0A1W2PPC4 97 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 PTP4A3O75365 173 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 TFPIP10646 304 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF3P17036 446 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 MLLT3P42568 568 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-220ENST00000492280 RACK1P63244 317 aaKnown RBP11.43□□□□□ -0.58
HMGN1-220ENST00000492280 AP3S1Q92572 193 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 GAL3ST4Q96RP7 486 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 SLC38A3Q99624 504 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 OR8D2Q9GZM6 311 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 OR10A5Q9H207 317 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 TRIM36Q9NQ86 728 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 ASB6Q9NWX5 421 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 RPS6KB2Q9UBS0 482 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF221Q9UK13 617 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 COPS3Q9UNS2 423 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 SLC35A3Q9Y2D2 325 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 PCDHGB2Q9Y5G2 931 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 HTR3EA5X5Y0 456 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 BLOC1S5-TXNDC5H3BN57 136 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 SMLR1H3BR10 107 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 HCN1O60741 890 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 KRT8P05787 483 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 PROS1P07225 676 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 SLC2A5P22732 501 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 PRTGQ2VWP7 1150 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 ZNF57Q68EA5 555 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-220ENST00000492280 APOOLQ6UXV4 268 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 TTLL10Q6ZVT0 673 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 C10orf53Q8N6V4 93 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 BMPERQ8N8U9 685 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 FAM181AQ8N9Y4 354 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 TSTD1Q8NFU3 115 aa11.43□□□□□ -0.58
HMGN1-220ENST00000492280 MOSPD2Q8NHP6 518 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms