RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 KLHL1Q9NR64 748 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 SH3BP4Q9P0V3 963 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 MYOTQ9UBF9 498 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 TBC1D24Q9ULP9 559 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 EXPH5Q8NEV8 1989 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 SCO2O43819 266 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 SSX4O60224 188 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 GCM2O75603 506 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TRAPPC2P0DI81 140 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TRAPPC2BP0DI82 140 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 PIPP12273 146 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 DRD2P14416 443 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TNFRSF1BP20333 461 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 PSMA1P25786 263 aaKnown RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TRHRP34981 398 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 OR1E2P47887 323 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 UQCRFS1P47985 274 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 PRIM2P49643 509 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 CRISP3P54108 245 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 PMP22Q01453 160 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 OC90Q02509 493 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF763Q0D2J5 394 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 FUT7Q11130 342 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 DUSP8Q13202 625 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF766Q5HY98 468 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 GCNT6Q5T4J0 391 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 RPUSD3Q6P087 351 aaKnown RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TMPRSS11AQ6ZMR5 421 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 PTCHD4Q6ZW05 846 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF615Q8N8J6 731 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 C7orf57Q8NEG2 295 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 OR9Q2Q8NGE9 314 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 OR8K3Q8NH51 312 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 GRHL3Q8TE85 626 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 COQ8BQ96D53 544 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 SCMH1Q96GD3 660 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 RASL10BQ96S79 203 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 PELOQ9BRX2 385 aaKnown RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TAPBPLQ9BX59 468 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ASPNQ9BXN1 380 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 RACGAP1Q9H0H5 632 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ANKRA2Q9H9E1 313 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 MYNNQ9NPC7 610 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 EXOSC4Q9NPD3 245 aaKnown RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TAS2R16Q9NYV7 291 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 MAT2BQ9NZL9 334 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 LRFN1Q9P244 771 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 UBR5O95071 2799 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ARRDC5A6NEK1 342 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 GADD45GO95257 159 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 WISP1O95388 367 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ATP1B1P05026 303 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 SCG5P05408 212 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 POU2F1P14859 743 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 CSNK2A2P19784 350 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 NT5EP21589 574 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 SOX3P41225 446 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 RORCP51449 518 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 HMGA2P52926 109 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 SCARB2Q14108 478 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 CDK10Q15131 360 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TRMT12Q53H54 448 aaKnown RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 MDGA2Q7Z553 956 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 GALNT12Q8IXK2 581 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 CCDC116Q8IYX3 515 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 SUN3Q8TAQ9 357 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 PIP5K1AQ99755 562 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 BHLHE41Q9C0J9 482 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 TMEM38AQ9H6F2 299 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ABI3Q9P2A4 366 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 COPS7AQ9UBW8 275 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 DTX4Q9Y2E6 619 aa8.61□□□□□ -1.03
BRCA1-219ENST00000491747 YARS2Q9Y2Z4 477 aaKnown RBP8.61□□□□□ -1.03
BRCA1-219ENST00000491747 ZAR1LA6NP61 321 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 NME6O75414 186 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-219ENST00000491747 GPX5O75715 221 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 SP1P08047 785 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 ETFAP13804 333 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 DDCP20711 480 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 RPS5P46782 204 aaKnown RBP8.6□□□□□ -1.03
BRCA1-219ENST00000491747 CYB561P49447 251 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 SSR4P51571 173 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 MAP4K2Q12851 820 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 TP53BP2Q13625 1128 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 HEPACAMQ14CZ8 416 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 EXOSC7Q15024 291 aaKnown RBP8.6□□□□□ -1.03
BRCA1-219ENST00000491747 EBPQ15125 230 aaKnown RBP8.6□□□□□ -1.03
BRCA1-219ENST00000491747 CEBPEQ15744 281 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 SSX1Q16384 188 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 NXNL2Q5VZ03 156 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF324BQ6AW86 544 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-219ENST00000491747 LYPD8Q6UX82 237 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 TAGAPQ8N103 731 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 AQP11Q8NBQ7 271 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 OR52N2Q8NGI0 321 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 GTPBP3Q969Y2 492 aaKnown RBP8.6□□□□□ -1.03
BRCA1-219ENST00000491747 CTHRC1Q96CG8 243 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 ART5Q96L15 291 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 MARCH7Q9H992 704 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 SLC35C2Q9NQQ7 365 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms