RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 FPR1P21462 350 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 TCEA1P23193 301 aaKnown RBP16.83■□□□□ 0.28
MCF2L-230ENST00000491028 DNAJA1P31689 397 aaKnown RBP16.83■□□□□ 0.28
MCF2L-230ENST00000491028 DCST1Q5T197 706 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 TTC33Q6PID6 262 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-230ENST00000491028 POMZP3Q6PJE2 187 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 WDR88Q6ZMY6 472 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 AMIGO2Q86SJ2 522 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 LINC00471Q8N535 108 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 OR4C15Q8NGM1 316 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 OR52J3Q8NH60 311 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 NEIL3Q8TAT5 605 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 SLC7A13Q8TCU3 470 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 STK35Q8TDR2 534 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 TMEM239Q8WW34 195 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 SLC6A15Q9H2J7 730 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 VNN3Q9NY84 501 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 STX18Q9P2W9 335 aaKnown RBP16.83■□□□□ 0.28
MCF2L-230ENST00000491028 STOML1Q9UBI4 398 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 TMCC3Q9ULS5 477 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 TRGV5A0A0B4J1U4 118 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 TRBV4-1A0A0J9YWV2 114 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 TMEM72A0PK05 275 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 A8MVM7 634 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 SUSD5O60279 629 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 E2F6O75461 281 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 WISP1O95388 367 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 BAG2O95816 211 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 ARHGDIAP52565 204 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 RAC1P63000 192 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 FOXK1P85037 733 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 EXOC3L2Q2M3D2 409 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 NHSL2Q5HYW2 709 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 TRILQ7L0X0 811 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 RNF113BQ8IZP6 322 aaKnown RBP16.82■□□□□ 0.28
MCF2L-230ENST00000491028 LSM14AQ8ND56 463 aaKnown RBP16.82■□□□□ 0.28
MCF2L-230ENST00000491028 OR5M1Q8NGP8 315 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 TMEM255BQ8WV15 326 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 DDIT4LQ96D03 193 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 NRBF2Q96F24 287 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 ALPK1Q96QP1 1244 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 DEFB127Q9H1M4 99 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 LDAHQ9H6V9 325 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 RNPEPL1Q9HAU8 725 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 NTN4Q9HB63 628 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 PLSCR2Q9NRY7 297 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 AP4B1Q9Y6B7 739 aa16.82■□□□□ 0.28
MCF2L-230ENST00000491028 FREM3P0C091 2139 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 A0A087WUU8 490 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 A0A1B0GVC2 190 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 SH3PXD2BA1X283 911 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 HTR3EA5X5Y0 456 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 GJE1A6NN92 205 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 ACTL6AO96019 429 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 IGF2P01344 180 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 FUT4P22083 530 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 CLK1P49759 484 aaKnown RBP16.81■□□□□ 0.28
MCF2L-230ENST00000491028 SYT14P1Q58G82 188 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 ZNF324BQ6AW86 544 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-230ENST00000491028 PODNL1Q6PEZ8 512 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 SHQ1Q6PI26 577 aaKnown RBP16.81■□□□□ 0.28
MCF2L-230ENST00000491028 ZNF730Q6ZMV8 503 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 RRM2BQ7LG56 351 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 SVOPLQ8N434 492 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 OR5K1Q8NHB7 308 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 KRCC1Q9NPI7 259 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-230ENST00000491028 MED31Q9Y3C7 131 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 ZNF337Q9Y3M9 751 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 LIPGQ9Y5X9 500 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 U3KQV3 271 aa16.81■□□□□ 0.28
MCF2L-230ENST00000491028 IGKV1D-42A0A075B6H8 117 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 ARRDC5A6NEK1 342 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 NPIPA5E9PKD4 350 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 H3BML4 177 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 ATXN7O15265 892 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-230ENST00000491028 EFNA2O43921 213 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 NPIPB7O75200 414 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 CCNB2O95067 398 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 CCNA2P20248 432 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 IL11P20809 199 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 UGT2B15P54855 530 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 MICAQ29983 383 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 MBOAT2Q6ZWT7 520 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 HIPK1Q86Z02 1210 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 OR4K5Q8NGD3 323 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 GPR137Q96N19 417 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 PSD2Q9BQI7 771 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 POTEKPQ9BYX7 375 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 KLHL4Q9C0H6 718 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 SEMA6AQ9H2E6 1030 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 EXO5Q9H790 373 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 NPIPA1Q9UND3 350 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 SLC6A5Q9Y345 797 aa16.8■□□□□ 0.28
MCF2L-230ENST00000491028 AQP7O14520 342 aa16.79■□□□□ 0.28
MCF2L-230ENST00000491028 ATP6V1G2O95670 118 aa16.79■□□□□ 0.28
MCF2L-230ENST00000491028 PEPDP12955 493 aa16.79■□□□□ 0.28
MCF2L-230ENST00000491028 ZNF23P17027 643 aa16.79■□□□□ 0.28
MCF2L-230ENST00000491028 POU3F2P20265 443 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-230ENST00000491028 IFNGR2P38484 337 aa16.79■□□□□ 0.28
MCF2L-230ENST00000491028 IST1P53990 364 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms