RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 BCAS1O75363 584 aaPredicted RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 E2F6O75461 281 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 UGT2B17O75795 530 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 ZFAND5O76080 213 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 IL33O95760 270 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 ABOP16442 354 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF24P17028 368 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 ITGA2P17301 1181 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 RHCEP18577 417 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 ATP6V1C1P21283 382 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 FPR1P21462 350 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 FUT4P22083 530 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 RRM2P31350 389 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 NR0B1P51843 470 aaKnown RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 SMSP52788 366 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 GPR85P60893 370 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 LARS2Q15031 903 aaKnown RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF141Q15928 474 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 DECR1Q16698 335 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 RNF220Q5VTB9 566 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 HLA-DQA1Q5Y7H0 255 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 SHQ1Q6PI26 577 aaKnown RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 C3P1Q6ZMU1 363 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 DEF8Q6ZN54 512 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 FGD2Q7Z6J4 655 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 STK32CQ86UX6 486 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 TSPYL5Q86VY4 417 aaPredicted RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 DOLPP1Q86YN1 238 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 CHERPQ8IWX8 916 aaKnown RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 HS3ST5Q8IZT8 346 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 SVOPLQ8N434 492 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 PACRGLQ8N7B6 248 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 C17orf47Q8NEP4 570 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 OR4C15Q8NGM1 316 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 OR6T1Q8NGN1 323 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 PHF10Q8WUB8 498 aaKnown RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 EFHD2Q96C19 240 aaPredicted RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 HSPBAP1Q96EW2 488 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 VMP1Q96GC9 406 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 EPYCQ99645 322 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 PIP5K1AQ99755 562 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 G6PC3Q9BUM1 346 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 REEP1Q9H902 201 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 CACYBPQ9HB71 228 aaKnown RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 CHST11Q9NPF2 352 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 C8orf4Q9NR00 106 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 RLIMQ9NVW2 624 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 FLRT3Q9NZU0 649 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 PFDN2Q9UHV9 154 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 SLC13A4Q9UKG4 626 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 ACAD8Q9UKU7 415 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 A4GNTQ9UNA3 340 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 SLC9A8Q9Y2E8 581 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 KLF13Q9Y2Y9 288 aaPredicted RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 MEMO1Q9Y316 297 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 SAMHD1Q9Y3Z3 626 aaKnown RBP6.88□□□□□ -1.31
CLDN1-202ENST00000490800 TESMINQ9Y4I5 508 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 LYVE1Q9Y5Y7 322 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 U3KQV3 271 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 MYO9AB2RTY4 2548 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 A0A1B0GTH9 108 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 CDHR4A6H8M9 788 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 G3V2T6 193 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 C19orf84I3L1E1 186 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 TNFRSF11BO00300 401 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 WWP2O00308 870 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 DLGAP1O14490 977 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 PRRG2O14669 202 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 ADAM10O14672 748 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 EI24O14681 340 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 ADAMDEC1O15204 470 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 HS6ST1O60243 411 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 SUSD5O60279 629 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 CDC40O60508 579 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLDN1-202ENST00000490800 TSPAN2O60636 221 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 TPST2O60704 377 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 OR2J2O76002 312 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 UTS2O95399 124 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 CLDN14O95500 239 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 CYP4B1P13584 511 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 IL7RP16871 459 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 AGAP20933 346 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 PRKACGP22612 351 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 LIMS1P48059 325 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 SSR4P51571 173 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF136P52737 540 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 HMGA2P52926 109 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 ATP12AP54707 1039 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 PSMD4P55036 377 aaKnown RBP6.87□□□□□ -1.31
CLDN1-202ENST00000490800 CDH12P55289 794 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 RGS8P57771 180 aaPredicted RBP6.87□□□□□ -1.31
CLDN1-202ENST00000490800 SPIBQ01892 262 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 DAG1Q14118 895 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 EXOC3L2Q2M3D2 409 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 EIPR1Q53HC9 387 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 OTUD3Q5T2D3 398 aaPredicted RBP6.87□□□□□ -1.31
CLDN1-202ENST00000490800 PDZK1Q5T2W1 519 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 MRPL2Q5T653 305 aaKnown RBP6.87□□□□□ -1.31
CLDN1-202ENST00000490800 IL20RBQ6UXL0 311 aa6.87□□□□□ -1.31
CLDN1-202ENST00000490800 HSDL2Q6YN16 418 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms