RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 FBXW9Q5XUX1 488 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 ABLIM2Q6H8Q1 611 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 FRRS1Q6ZNA5 592 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 HMGN2P46Q86SG4 172 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 ATG4DQ86TL0 474 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-216ENST00000490796 LRRC34Q8IZ02 419 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 ZNF75CPQ92670 426 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-216ENST00000490796 DNAJA3Q96EY1 480 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 CCDC106Q9BWC9 280 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 TRIM2Q9C040 744 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 SAP130Q9H0E3 1048 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 BARX1Q9HBU1 254 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-216ENST00000490796 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.43■□□□□ 0.38
SREBF1-216ENST00000490796 POU2F3Q9UKI9 436 aa17.43■□□□□ 0.38
SREBF1-216ENST00000490796 V9GYY5 206 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-216ENST00000490796 IGKV3D-15A0A087WSY6 115 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 OR5H1A6NKK0 313 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 ABCD4O14678 606 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 DNPH1O43598 174 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 SCN2BO60939 215 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 MRPL33O75394 65 aaKnown RBP17.42■□□□□ 0.38
SREBF1-216ENST00000490796 RAD51DO75771 328 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 PMS2P2O95744 297 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 UQCRBP14927 111 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 COX5AP20674 150 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 MAGEA8P43361 318 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 IDH2P48735 452 aaKnown RBP17.42■□□□□ 0.38
SREBF1-216ENST00000490796 NME5P56597 212 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 CHRNEQ04844 493 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 KLHL17Q6TDP4 642 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 TMEM108Q6UXF1 575 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-216ENST00000490796 MREGQ8N565 214 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 ZNF433Q8N7K0 673 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-216ENST00000490796 FAM71CQ8NEG0 241 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 RADILQ96JH8 1075 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 PANX1Q96RD7 426 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 ZBTB18Q99592 522 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 EXOSC3Q9NQT5 275 aaKnown RBP17.42■□□□□ 0.38
SREBF1-216ENST00000490796 ASB6Q9NWX5 421 aa17.42■□□□□ 0.38
SREBF1-216ENST00000490796 CCDC154A6NI56 674 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 RAMP1O60894 148 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 EDNRAP25101 427 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 PHC1P78364 1004 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 TXNL4AP83876 142 aaKnown RBP17.41■□□□□ 0.38
SREBF1-216ENST00000490796 DMTNQ08495 405 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 HHATQ5VTY9 493 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 AGAP6Q5VW22 663 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 DNAJC14Q6Y2X3 702 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-216ENST00000490796 RNF130Q86XS8 419 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 CMIPQ8IY22 773 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 DEPDC4Q8N2C3 294 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 OR52N5Q8NH56 324 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 DDIT4LQ96D03 193 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 ZG16BQ96DA0 208 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 ARL5BQ96KC2 179 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 CCDC115Q96NT0 180 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 TRNT1Q96Q11 434 aaKnown RBP17.41■□□□□ 0.38
SREBF1-216ENST00000490796 SORT1Q99523 831 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 NAA11Q9BSU3 229 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-216ENST00000490796 REG4Q9BYZ8 158 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 OR11A1Q9GZK7 315 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 C20orf27Q9GZN8 174 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 SLCO5A1Q9H2Y9 848 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 TMEM181Q9P2C4 612 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 BTNL2Q9UIR0 455 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 MGAT4BQ9UQ53 548 aa17.41■□□□□ 0.38
SREBF1-216ENST00000490796 HMGN4O00479 90 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 EIF1BO60739 113 aaKnown RBP17.4■□□□□ 0.38
SREBF1-216ENST00000490796 BCAS1O75363 584 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-216ENST00000490796 PGM3O95394 542 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 ACVR1BP36896 505 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 LRRC74AQ0VAA2 488 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 FUT5Q11128 374 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 PGGHGQ32M88 737 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 CEP85LQ5SZL2 805 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 SLC22A25Q6T423 547 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 ZNF621Q6ZSS3 439 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 PRIMA1Q86XR5 153 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 ADGRG3Q86Y34 549 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 MAPK1IP1LQ8NDC0 245 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 PMM1Q92871 262 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 TRAF4Q9BUZ4 470 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-216ENST00000490796 MEAF6Q9HAF1 191 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 PNPOQ9NVS9 261 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 TAS2R16Q9NYV7 291 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 UPB1Q9UBR1 384 aa17.4■□□□□ 0.38
SREBF1-216ENST00000490796 ABCA1O95477 2261 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 TMED7-TICAM2A0A0A6YYA0 188 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 CLDN24A6NM45 220 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 ZNF716A6NP11 495 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 DHRS4L1P0CG22 281 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 NR2F1P10589 423 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 IL7RP16871 459 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 ZNF83P51522 516 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 POLR2HP52434 150 aaKnown RBP17.39■□□□□ 0.37
SREBF1-216ENST00000490796 UFM1P61960 85 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 SLC35A1P78382 337 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 OR7E24Q6IFN5 339 aa17.39■□□□□ 0.37
SREBF1-216ENST00000490796 SEZ6L2Q6UXD5 910 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms