RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ZHX1-C8orf76Q96EF9 292 aa27.84■■■□□ 2.05
LDB1-204ENST00000490751 HDHD5Q9BXW7 423 aa27.84■■■□□ 2.05
LDB1-204ENST00000490751 HDGFL3Q9Y3E1 203 aa27.84■■■□□ 2.05
LDB1-204ENST00000490751 ZNF469Q96JG9 3925 aaPredicted RBP27.84■■■□□ 2.05
LDB1-204ENST00000490751 DSPPQ9NZW4 1301 aa27.84■■■□□ 2.05
LDB1-204ENST00000490751 ZNF724A8MTY0 619 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 PMS2P2O95744 297 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 ADAP00813 363 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 TFPTP0C1Z6 253 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 IL32P24001 234 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 FKBP2P26885 142 aaKnown RBP27.83■■■□□ 2.05
LDB1-204ENST00000490751 CRISP3P54108 245 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 ABLIM2Q6H8Q1 611 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 LSRQ86X29 649 aaPredicted RBP27.83■■■□□ 2.05
LDB1-204ENST00000490751 VRK2Q86Y07 508 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 OR52P1PQ8NH57 321 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 SLC38A5Q8WUX1 472 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 PAIP1Q9H074 479 aaKnown RBP27.83■■■□□ 2.05
LDB1-204ENST00000490751 PRSS50Q9UI38 385 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 OSGIN1Q9UJX0 560 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 PCDHB14Q9Y5E9 798 aa27.83■■■□□ 2.05
LDB1-204ENST00000490751 MAP1AP78559 2803 aaPredicted RBP27.82■■■□□ 2.04
LDB1-204ENST00000490751 PRR14LQ5THK1 2151 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 TMED7-TICAM2A0A0A6YYA0 188 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 CFAP73A6NFT4 308 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 ZNF814B7Z6K7 855 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 FAAHO00519 579 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 UQCRBP14927 111 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 CLK1P49759 484 aaKnown RBP27.82■■■□□ 2.04
LDB1-204ENST00000490751 POLR2HP52434 150 aaKnown RBP27.82■■■□□ 2.04
LDB1-204ENST00000490751 EPS8Q12929 822 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 RPS26P11Q5JNZ5 115 aaPredicted RBP27.82■■■□□ 2.04
LDB1-204ENST00000490751 ZNF836Q6ZNA1 936 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 GOLGA6L1Q8N7Z2 621 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 TMEM19Q96HH6 336 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 CCDC28BQ9BUN5 200 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 RLIMQ9NVW2 624 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 TMED7Q9Y3B3 224 aa27.82■■■□□ 2.04
LDB1-204ENST00000490751 FPR1P21462 350 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 EDNRAP25101 427 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 TACR3P29371 465 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 SLC1A3P43003 542 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 AQP5P55064 265 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 P2RY6Q15077 328 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 LIN52Q52LA3 116 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 ALKBH2Q6NS38 261 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 ZC3HAV1Q7Z2W4 902 aaKnown RBP27.81■■■□□ 2.04
LDB1-204ENST00000490751 HDXQ7Z353 690 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 GALNT5Q7Z7M9 940 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 ZNF440Q8IYI8 595 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 KISS1RQ969F8 398 aaPredicted RBP27.81■■■□□ 2.04
LDB1-204ENST00000490751 PLPPR2Q96GM1 343 aa27.81■■■□□ 2.04
LDB1-204ENST00000490751 THUMPD1Q9NXG2 353 aaKnown RBP27.81■■■□□ 2.04
LDB1-204ENST00000490751 TMEM72A0PK05 275 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 CDHR4A6H8M9 788 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 DNPH1O43598 174 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 NR1H2P55055 460 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 RIPPLY3P57055 190 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 OR2B6P58173 313 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 ITGADQ13349 1161 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 Q6ZT83 130 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 FUNDC1Q8IVP5 155 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 WFDC11Q8NEX6 87 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 PIGTQ969N2 578 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 INTS9Q9NV88 658 aaKnown RBP27.8■■■□□ 2.04
LDB1-204ENST00000490751 EMC3Q9P0I2 261 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 TMEM181Q9P2C4 612 aa27.8■■■□□ 2.04
LDB1-204ENST00000490751 ZNF443Q9Y2A4 671 aaPredicted RBP27.8■■■□□ 2.04
LDB1-204ENST00000490751 DSCAMO60469 2012 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 IGKV3D-15A0A087WSY6 115 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 TMEM247A6NEH6 219 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 HMGB1P1B2RPK0 211 aaPredicted RBP27.79■■■□□ 2.04
LDB1-204ENST00000490751 CLIC1O00299 241 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 ZNF208O43345 1280 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 GKN3PP0CG01 181 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 HOXB9P17482 250 aaPredicted RBP27.79■■■□□ 2.04
LDB1-204ENST00000490751 PDK3Q15120 406 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 RGNQ15493 299 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 ZNF704Q6ZNC4 412 aaPredicted RBP27.79■■■□□ 2.04
LDB1-204ENST00000490751 C20orf204Q6ZNR8 217 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 DDIT4LQ96D03 193 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 CCL19Q99731 98 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 PIP5K1AQ99755 562 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 CCDC167Q9P0B6 97 aa27.79■■■□□ 2.04
LDB1-204ENST00000490751 A0A096LPI6 279 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 ZNF716A6NP11 495 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 NUDT7P0C024 238 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 HOXC12P31275 282 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 TAB1Q15750 504 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 BLOC1S3Q6QNY0 202 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 BHLHA15Q7RTS1 189 aaPredicted RBP27.78■■■□□ 2.04
LDB1-204ENST00000490751 KRTAP1-3Q8IUG1 177 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 ZNF100Q8IYN0 542 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 PIGXQ8TBF5 258 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 RAD21L1Q9H4I0 556 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 ARGLU1Q9NWB6 273 aaPredicted RBP27.78■■■□□ 2.04
LDB1-204ENST00000490751 TRAPPC4Q9Y296 219 aa27.78■■■□□ 2.04
LDB1-204ENST00000490751 A0A0G2JPF8 293 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 HNRNPCL2B2RXH8 293 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 HNRNPCL3B7ZW38 293 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms