RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 POP5Q969H6 163 aaKnown RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 LMF2Q9BU23 707 aaKnown RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 DYNLRB1Q9NP97 96 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 AURKAIP1Q9NWT8 199 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 C1RLQ9NZP8 487 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 EMC3Q9P0I2 261 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 CRNNQ9UBG3 495 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 TESQ9UGI8 421 aaKnown RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 UTS2RQ9UKP6 389 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 ZKSCAN5Q9Y2L8 839 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 NOSIPQ9Y314 301 aaKnown RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 RNF11Q9Y3C5 154 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 SOX21Q9Y651 276 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 CAPN6Q9Y6Q1 641 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 ZNF780BQ9Y6R6 833 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 KIAA1109Q2LD37 5005 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 A0A087WV62 115 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 ETV2O00321 342 aaPredicted RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 FRS3O43559 492 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 UGDHO60701 494 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 GUCY1B2O75343 617 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 SEC14L2O76054 403 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 SLITRK5O94991 958 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 IGLV1-44P01699 117 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 MED14OSP0DP75 135 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 SLC7A1P30825 629 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 ALDH9A1P49189 494 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 PSMD4P55036 377 aaKnown RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 PROK1P58294 105 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 KRTAP10-2P60368 255 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 MRPS11P82912 194 aaKnown RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 TOMM34Q15785 309 aaPredicted RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 GLE1Q53GS7 698 aaKnown RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 GALNT18Q6P9A2 607 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 RAD9BQ6WBX8 426 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 SYT10Q6XYQ8 523 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 IKBIPQ70UQ0 350 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 MYPOPQ86VE0 399 aaPredicted RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 TEX9Q8N6V9 391 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 L3MBTL4Q8NA19 623 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 ATP6V1C2Q8NEY4 427 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 B4GALNT2Q8NHY0 566 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 JADE3Q92613 823 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 HOXB13Q92826 284 aaPredicted RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 EXT2Q93063 718 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 UBXN10Q96LJ8 280 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 ATOH8Q96SQ7 321 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 HHATLQ9HCP6 504 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 Q9N2J8 555 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 PPANQ9NQ55 473 aaKnown RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 SLC7A10Q9NS82 523 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 NUDT4Q9NZJ9 180 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 C19orf53Q9UNZ5 99 aaPredicted RBP6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 ACOT9Q9Y305 439 aa6.06□□□□□ -1.44
PDLIM1-203ENST00000490391 DOCK11Q5JSL3 2073 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 ABCA13Q86UQ4 5058 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 TET2Q6N021 2002 aaPredicted RBP6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 PPIAL4EA0A075B759 164 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 PPIAL4CA0A0B4J2A2 164 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 PPIAL4DF5H284 164 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 CCDC188H7C350 402 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 UBXN8O00124 270 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 UPK1AO00322 258 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 SYNGR3O43761 229 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 COQ9O75208 318 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 IGKV3-15P01624 115 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 KRT14P02533 472 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 OPN1MWP04001 364 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 GSNP06396 782 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 PPIAL4FP0DN26 164 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 OPN1MW2P0DN77 364 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 OPN1MW3P0DN78 364 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 PRKCAP17252 672 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 TCN1P20061 433 aaPredicted RBP6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 MAP3K8P41279 467 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 ASMTP46597 345 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 DIO1P49895 249 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 SLC16A1P53985 500 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 ATP6V0D1P61421 351 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 TGFBR3Q03167 851 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 ZNF117Q03924 483 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 SELENBP1Q13228 472 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 CDK5R2Q13319 367 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 SLC29A2Q14542 456 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 C2orf68Q2NKX9 166 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 C3orf36Q3SXR2 165 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 SLC25A53Q5H9E4 307 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 ARMCX4Q5H9R4 360 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 ZNF311Q5JNZ3 666 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 AVPI1Q5T686 147 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 TSPO2Q5TGU0 170 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 TTC27Q6P3X3 843 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 CBLN3Q6UW01 205 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 C9orf139Q6ZV77 190 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 OR2L13Q8N349 312 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 PIK3R3Q92569 461 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 RAB39BQ96DA2 213 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 KIRREL1Q96J84 757 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 ANKRD27Q96NW4 1050 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 KCNS3Q9BQ31 491 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms