RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LGALS2P05162 132 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 PNMTP11086 282 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 AZU1P20160 251 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 HNF1AP20823 631 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 IMPDH1P20839 514 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 MMP11P24347 488 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 CAV2P51636 162 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 BIDP55957 195 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 RIPK4P57078 832 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 CSNK1G2P78368 415 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 PSG7Q13046 419 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 BEND3Q5T5X7 828 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 ATAD3BQ5T9A4 648 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 TPGS2Q68CL5 300 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 IL34Q6ZMJ4 242 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 CCDC80Q76M96 950 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 OR2T3Q8NH03 318 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 DCUN1D4Q92564 292 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 CCNL2Q96S94 520 aaPredicted RBP2.68□□□□□ -1.98
CD46-216ENST00000490278 NARFLQ9H6Q4 476 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 APMAPQ9HDC9 416 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 PIPOXQ9P0Z9 390 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 RPS6KB2Q9UBS0 482 aa2.68□□□□□ -1.98
CD46-216ENST00000490278 A0A0G2JRQ6 117 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 A0A1B0GUS0 222 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 METTL21EPA6NDL7 271 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 TRDCB7Z8K6 153 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 H0YCG3 227 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 PRRG1O14668 218 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 HCRTR1O43613 425 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 SUPT7LO94864 414 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 IGHG4P01861 327 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 RBMY1CP0DJD4 496 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 PRG2P13727 222 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 LAP3P28838 519 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 IFNAR2P48551 515 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 APOC4P55056 127 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 RIPK1Q13546 671 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 KLF17Q5JT82 389 aaPredicted RBP2.67□□□□□ -1.98
CD46-216ENST00000490278 CFAP157Q5JU67 520 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 C1orf146Q5VVC0 180 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 GALNT17Q6IS24 598 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 GDPD3Q7L5L3 318 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 KRTAP11-1Q8IUC1 163 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 CCDC50Q8IVM0 306 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 ZNF540Q8NDQ6 660 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 CATSPER1Q8NEC5 780 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 HTR3CQ8WXA8 447 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 ST8SIA1Q92185 356 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 EMG1Q92979 244 aaKnown RBP2.67□□□□□ -1.98
CD46-216ENST00000490278 ELSPBP1Q96BH3 223 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 TMEM101Q96IK0 257 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 TBX15Q96SF7 602 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 POLR2J2Q9GZM3 115 aaKnown RBP2.67□□□□□ -1.98
CD46-216ENST00000490278 POLR2J3Q9H1A7 115 aaKnown RBP2.67□□□□□ -1.98
CD46-216ENST00000490278 POPDC2Q9HBU9 364 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 RAB18Q9NP72 206 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 TREM2Q9NZC2 230 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 CDH10Q9Y6N8 788 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 ATRXP46100 2492 aa2.67□□□□□ -1.98
CD46-216ENST00000490278 PLEKHG1Q9ULL1 1385 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 TDRD6O60522 2096 aaKnown RBP2.66□□□□□ -1.98
CD46-216ENST00000490278 WI2-2373I1.2A0A1W2PRP0 233 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 F5H6K3 240 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 ARPC3O15145 178 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 ZNF861PO60384 105 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 ZNF780AO75290 641 aaPredicted RBP2.66□□□□□ -1.98
CD46-216ENST00000490278 COX5AP20674 150 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 GCAP28676 217 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 CD1BP29016 333 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 HTR1FP30939 366 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 PTGDSP41222 190 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 MAP2K1Q02750 393 aaPredicted RBP2.66□□□□□ -1.98
CD46-216ENST00000490278 KLRC3Q07444 240 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 C1orf61Q13536 156 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 ARFRP1Q13795 201 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 NSUN5P1Q3KNT7 163 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 SLC35F2Q8IXU6 374 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 SLC34A3Q8N130 599 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 TMEM123Q8N131 208 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 OR2L13Q8N349 312 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 ZNF740Q8NDX6 193 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 MAIP1Q8WWC4 291 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 CHCHD10Q8WYQ3 142 aaPredicted RBP2.66□□□□□ -1.98
CD46-216ENST00000490278 PIGCQ92535 297 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 EFHD2Q96C19 240 aaPredicted RBP2.66□□□□□ -1.98
CD46-216ENST00000490278 TRIM44Q96DX7 344 aaPredicted RBP2.66□□□□□ -1.98
CD46-216ENST00000490278 ZSCAN5AQ9BUG6 496 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 SELENOIQ9C0D9 397 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 NANOGQ9H9S0 305 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 UFSP2Q9NUQ7 469 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 COPS3Q9UNS2 423 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 MEMO1Q9Y316 297 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 THSD7BQ9C0I4 1608 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 SH3TC1Q8TE82 1336 aa2.66□□□□□ -1.98
CD46-216ENST00000490278 IGHV3OR16-13A0A075B7E8 117 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 PSMB11A5LHX3 300 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 USP27XA6NNY8 438 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 IDSB3KWA1 339 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms