RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CTBP2P56545 445 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 GNGT1P63211 74 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 CSNK2A1P68400 391 aaPredicted RBP15.51■□□□□ 0.07
MDC1-206ENST00000489540 SIRPAP78324 504 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 CACNA1CQ13936 2221 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 GDF7Q7Z4P5 450 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 LUZP2Q86TE4 346 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 MTDHQ86UE4 582 aaKnown RBP15.51■□□□□ 0.07
MDC1-206ENST00000489540 DDIT4LQ96D03 193 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 C14orf79Q96F83 325 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 ECSITQ9BQ95 431 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 EVA1AQ9H8M9 152 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 GP6Q9HCN6 339 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 KCNN3Q9UGI6 736 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 TMED7Q9Y3B3 224 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 ARHGAP21Q5T5U3 1957 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 UNC79Q9P2D8 2635 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 SULT2B1O00204 365 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 SMNDC1O75940 238 aaKnown RBP eCLIP15.51■□□□□ 0.07
MDC1-206ENST00000489540 CGAP01215 116 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 CD8BP10966 210 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 PRF1P14222 555 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 ENPP1P22413 925 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 PCYT1AP49585 367 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 PCBP3P57721 371 aaKnown RBP15.51■□□□□ 0.07
MDC1-206ENST00000489540 SORDQ00796 357 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 VWA1Q6PCB0 445 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 FCRLAQ7L513 359 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 ARMC8Q8IUR7 673 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 ZNF295-AS1Q8N0V1 137 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 CADM2Q8N3J6 435 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 OR6K3Q8NGY3 331 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 RNF128Q8TEB7 428 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 SLC39A3Q9BRY0 314 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 PLSCR4Q9NRQ2 329 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 SLC13A4Q9UKG4 626 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 PROCRQ9UNN8 238 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 TRAPPC4Q9Y296 219 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 NBPF19A0A087WUL8 3843 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 KIAA1549Q9HCM3 1950 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 FXYD1O00168 92 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 DNPH1O43598 174 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 MFN2O95140 757 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 COX4I1P13073 169 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 PRG2P13727 222 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 CCNA2P20248 432 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 CXCR1P25024 350 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 AQP1P29972 269 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 PCGF2P35227 344 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 KIR2DL3P43628 341 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 DIO1P49895 249 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 GZMMP51124 257 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 RABL3Q5HYI8 236 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 INTS11Q5TA45 600 aaKnown RBP15.5■□□□□ 0.07
MDC1-206ENST00000489540 PATL1Q86TB9 770 aaKnown RBP15.5■□□□□ 0.07
MDC1-206ENST00000489540 ZZZ3Q8IYH5 903 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 ZHX1-C8orf76Q96EF9 292 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 TACO1Q9BSH4 297 aaKnown RBP15.5■□□□□ 0.07
MDC1-206ENST00000489540 KLHL28Q9NXS3 571 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 ELOVL5Q9NYP7 299 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 CLEC4AQ9UMR7 237 aa15.5■□□□□ 0.07
MDC1-206ENST00000489540 TMEM72A0PK05 275 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 M0QX08 132 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 PMS2P2O95744 297 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 MYBPHQ13203 477 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 VMACQ2NL98 169 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 TMEM201Q5SNT2 666 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 CALHM3Q86XJ0 350 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 POU5F2Q8N7G0 328 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 ABHD3Q8WU67 409 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 RCN3Q96D15 328 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 POTEKPQ9BYX7 375 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 EFCAB1Q9HAE3 211 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 GALNT8Q9NY28 637 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 TMEM181Q9P2C4 612 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 KLHL9Q9P2J3 617 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 AP3M1Q9Y2T2 418 aa15.49■□□□□ 0.07
MDC1-206ENST00000489540 DOCK7Q96N67 2140 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 HEATR5AQ86XA9 2040 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 PKDREJQ9NTG1 2253 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 TUBAL3A6NHL2 446 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 TPST1O60507 370 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 CYTIPO60759 359 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 C8BP07358 591 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 YES1P07947 543 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 ERICH5Q6P6B1 374 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 ZNF474Q6S9Z5 364 aaPredicted RBP15.48■□□□□ 0.07
MDC1-206ENST00000489540 LSMEM1Q8N8F7 131 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 ZNF610Q8N9Z0 462 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 FAM222BQ8WU58 562 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 CMTM5Q96DZ9 223 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 ARL5BQ96KC2 179 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 ZNF559Q9BR84 538 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 RSPO3Q9BXY4 272 aaPredicted RBP15.48■□□□□ 0.07
MDC1-206ENST00000489540 TRIM2Q9C040 744 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 OR11A1Q9GZK7 315 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 MYLK2Q9H1R3 596 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 OPN3Q9H1Y3 402 aaPredicted RBP15.48■□□□□ 0.07
MDC1-206ENST00000489540 PIF1Q9H611 641 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 KLHL13Q9P2N7 655 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms