RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TMPPEQ6ZT21 453 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 UBTD2Q8WUN7 234 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 KTI12Q96EK9 354 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-233ENST00000489352 FRG2BQ96QU4 278 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 KLHDC3Q9BQ90 382 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 LMF2Q9BU23 707 aaKnown RBP9.84□□□□□ -0.83
HDAC6-233ENST00000489352 MRPL37Q9BZE1 423 aaKnown RBP9.84□□□□□ -0.83
HDAC6-233ENST00000489352 ZNF385DQ9H6B1 395 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 EQTNQ9NQ60 294 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 UBAP1Q9NZ09 502 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 PURGQ9UJV8 347 aaKnown RBP9.84□□□□□ -0.83
HDAC6-233ENST00000489352 NFU1Q9UMS0 254 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 C19orf53Q9UNZ5 99 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-233ENST00000489352 SLC9A8Q9Y2E8 581 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 PCDHGB5Q9Y5G0 923 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 PSAT1Q9Y617 370 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 ISPDA4D126 451 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 SRRM5B3KS81 715 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 CLDN25C9JDP6 229 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 UBXN8O00124 270 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 TPD52L2O43399 206 aaKnown RBP9.83□□□□□ -0.84
HDAC6-233ENST00000489352 BANF1O75531 89 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 RP2O75695 350 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 JUNP05412 331 aaKnown RBP9.83□□□□□ -0.84
HDAC6-233ENST00000489352 FAM157BP0CG42 384 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 NTF4P34130 210 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 GPC1P35052 558 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 SEC24CP53992 1094 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 TUBA1BP68363 451 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 TUBA4AP68366 448 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 ZNF117Q03924 483 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 ILF2Q12905 390 aaKnown RBP9.83□□□□□ -0.84
HDAC6-233ENST00000489352 ZNF154Q13106 437 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 GTF2H2Q13888 395 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 TRADDQ15628 312 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 MMEL1Q495T6 779 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 GLIPR1L2Q4G1C9 344 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 RNASEH2BQ5TBB1 312 aaKnown RBP9.83□□□□□ -0.84
HDAC6-233ENST00000489352 GTF2H2CQ6P1K8 395 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 TUBA1AQ71U36 451 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 MTERF4Q7Z6M4 381 aaKnown RBP9.83□□□□□ -0.84
HDAC6-233ENST00000489352 PPIL6Q8IXY8 311 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 TMCO5AQ8N6Q1 288 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 L3MBTL4Q8NA19 623 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 DEFB108BQ8NET1 73 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 IL17RDQ8NFM7 739 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 RFWD2Q8NHY2 731 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 LINC01006Q8NI28 216 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 LRRC39Q96DD0 335 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 RBBP8Q99708 897 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 SYT3Q9BQG1 590 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 ELOVL6Q9H5J4 265 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 CAB39LQ9H9S4 337 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 CRLF2Q9HC73 371 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 CRNNQ9UBG3 495 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-233ENST00000489352 ZNF346Q9UL40 294 aaKnown RBP9.83□□□□□ -0.84
HDAC6-233ENST00000489352 CARD8Q9Y2G2 431 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 ACTL7BQ9Y614 415 aa9.83□□□□□ -0.84
HDAC6-233ENST00000489352 IGHV3OR16-10A0A075B7F0 116 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 A0A096LPK6 155 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 GNG14A0A1W2PPG7 69 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 A0A1W2PQD3 144 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 AGAP5A6NIR3 686 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 UPK1AO00322 258 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 XPNPEP2O43895 674 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 PPP1R3DO95685 299 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 FGGP02679 453 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 IL3P08700 152 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 GFAPP14136 432 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 STMN1P16949 149 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 SUMO3P55854 103 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-233ENST00000489352 PROK1P58294 105 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 NPRL3Q12980 569 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 CD226Q15762 336 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 TOMM34Q15785 309 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-233ENST00000489352 NRN1LQ496H8 165 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 HP1BP3Q5SSJ5 553 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-233ENST00000489352 TRMT10BQ6PF06 316 aaKnown RBP9.82□□□□□ -0.84
HDAC6-233ENST00000489352 ZNF620Q6ZNG0 422 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 PARP8Q8N3A8 854 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 NAT8LQ8N9F0 302 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 POMGNT2Q8NAT1 580 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 OR6Y1Q8NGX8 325 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 TRIM44Q96DX7 344 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-233ENST00000489352 CDK15Q96Q40 435 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 MARCH7Q9H992 704 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 SEC61A2Q9H9S3 476 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 DUSP13Q9UII6 198 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 WIPI2Q9Y4P8 454 aa9.82□□□□□ -0.84
HDAC6-233ENST00000489352 IGHV2OR16-5A0A0B4J2B6 119 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 IGHV1-69-2A0A0G2JMI3 117 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 MDFIC2A0A1B0GVS7 189 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 A0A1W2PPW3 197 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 SYCE1LA8MT33 242 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 NR5A2O00482 541 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 ULK1O75385 1050 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 NCR1O76036 304 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 H6PDO95479 791 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 IGLV1-44P01699 117 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 NAT2P11245 290 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms