RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 MRGBPQ9NV56 204 aa12.05□□□□□ -0.48
LMO4-203ENST00000489303 KLHL13Q9P2N7 655 aa12.05□□□□□ -0.48
LMO4-203ENST00000489303 PLEKHA6Q9Y2H5 1048 aa12.05□□□□□ -0.48
LMO4-203ENST00000489303 NDUFAF1Q9Y375 327 aa12.05□□□□□ -0.48
LMO4-203ENST00000489303 HDGFL3Q9Y3E1 203 aa12.05□□□□□ -0.48
LMO4-203ENST00000489303 DSPPQ9NZW4 1301 aa12.05□□□□□ -0.48
LMO4-203ENST00000489303 FAM221AA4D161 298 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 CDHR4A6H8M9 788 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 ANGPT2O15123 496 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 BMP2P12643 396 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 PPP3CBP16298 524 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 CCNA2P20248 432 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 SLC1A3P43003 542 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 DIO1P49895 249 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 RASGEF1BQ0VAM2 473 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 EPS8Q12929 822 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 MAPK11Q15759 364 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 ZNF311Q5JNZ3 666 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 RPS26P11Q5JNZ5 115 aaPredicted RBP12.04□□□□□ -0.48
LMO4-203ENST00000489303 PAGE3Q5JUK9 113 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 RNF220Q5VTB9 566 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 ZNF836Q6ZNA1 936 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 VRK2Q86Y07 508 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 CDC20BQ86Y33 519 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 KRT73Q86Y46 540 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 TUSC5Q8IXB3 177 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 TSPEARQ8WU66 669 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 SPATA5L1Q9BVQ7 753 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 SPATA9Q9BWV2 254 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 BCL2L10Q9HD36 194 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 KLHL28Q9NXS3 571 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 ZNF443Q9Y2A4 671 aaPredicted RBP12.04□□□□□ -0.48
LMO4-203ENST00000489303 TESMINQ9Y4I5 508 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 VPS13CQ709C8 3753 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 MED12LQ86YW9 2145 aa12.04□□□□□ -0.48
LMO4-203ENST00000489303 MAP1AP78559 2803 aaPredicted RBP12.03□□□□□ -0.48
LMO4-203ENST00000489303 TMED7-TICAM2A0A0A6YYA0 188 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 IGHV3-15A0A0B4J1V0 119 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 AP3D1O14617 1153 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 ZNF208O43345 1280 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 DNPH1O43598 174 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 CYTIPO60759 359 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 PMS2P2O95744 297 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 FESP07332 822 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 VIMP08670 466 aaKnown RBP12.03□□□□□ -0.48
LMO4-203ENST00000489303 NUDT7P0C024 238 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 CD1EP15812 388 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 CXCR1P25024 350 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 TACR3P29371 465 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 ARFIP2P53365 341 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 WBP2NLQ6ICG8 309 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 MTDHQ86UE4 582 aaKnown RBP12.03□□□□□ -0.48
LMO4-203ENST00000489303 ADGRG3Q86Y34 549 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 MAL2Q969L2 176 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 WFIKKN1Q96NZ8 548 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 TMEM120AQ9BXJ8 343 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 GSX1Q9H4S2 264 aaPredicted RBP12.03□□□□□ -0.48
LMO4-203ENST00000489303 MED4Q9NPJ6 270 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 SLC52A3Q9NQ40 469 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 RLIMQ9NVW2 624 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 ZNF446Q9NWS9 450 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 SLC25A37Q9NYZ2 338 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 EMC3Q9P0I2 261 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 VAPAQ9P0L0 249 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 SLAMF8Q9P0V8 285 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 ST6GALNAC2Q9UJ37 374 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 GPR52Q9Y2T5 361 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 TMED7Q9Y3B3 224 aa12.03□□□□□ -0.48
LMO4-203ENST00000489303 ANKHD1Q8IWZ3 2542 aaKnown RBP12.02□□□□□ -0.48
LMO4-203ENST00000489303 SMAD9O15198 467 aaKnown RBP12.02□□□□□ -0.49
LMO4-203ENST00000489303 PGM3O95394 542 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 GKN3PP0CG01 181 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 ARAFP10398 606 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 CD99P14209 185 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 ETS2P15036 469 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 HOXB9P17482 250 aaPredicted RBP12.02□□□□□ -0.49
LMO4-203ENST00000489303 SLC6A2P23975 617 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 DNASE1P24855 282 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 OR2B6P58173 313 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 CDK6Q00534 326 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 PLAURQ03405 335 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 REEP3Q6NUK4 255 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 DHDDSQ86SQ9 333 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 MSRB3Q8IXL7 192 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 CADM2Q8N3J6 435 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 NFKBIDQ8NI38 313 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 PIGXQ8TBF5 258 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 NINJ1Q92982 152 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 ZC3HAV1LQ96H79 300 aaKnown RBP12.02□□□□□ -0.49
LMO4-203ENST00000489303 POM121Q96HA1 1249 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 ZNF607Q96SK3 696 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 PSD2Q9BQI7 771 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 NAA11Q9BSU3 229 aaPredicted RBP12.02□□□□□ -0.49
LMO4-203ENST00000489303 HDHD5Q9BXW7 423 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 CXXC4Q9H2H0 198 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 BCO1Q9HAY6 547 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 TMEM181Q9P2C4 612 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 OSGIN1Q9UJX0 560 aa12.02□□□□□ -0.49
LMO4-203ENST00000489303 SLC13A4Q9UKG4 626 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms