RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TACR3P29371 465 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 DIO1P49895 249 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 CYLC2Q14093 348 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-218ENST00000489037 SCARB2Q14108 478 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 GUSBP1Q15486 140 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 CYP51A1Q16850 503 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 EXOC3L2Q2M3D2 409 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 WBP2NLQ6ICG8 309 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 DLEU7Q6UYE1 221 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 BEND4Q6ZU67 534 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 CADM2Q8N3J6 435 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 ANKRD27Q96NW4 1050 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 DACH2Q96NX9 599 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 CGREF1Q99674 301 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 TMEM38AQ9H6F2 299 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 SLC13A4Q9UKG4 626 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 ANGPT4Q9Y264 503 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 TMED7Q9Y3B3 224 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 SH3D21A4FU49 640 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 PRORSD1PA6NEY8 169 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 A6NNC1 897 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 C16orf97H3BN30 126 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF208O43345 1280 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 GOSR1O95249 250 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 PMS2P2O95744 297 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 CGAP01215 116 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 YES1P07947 543 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 GKN3PP0CG01 181 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 APCP25054 2843 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 AGTR1P30556 359 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 ADSLP30566 484 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-218ENST00000489037 FAM27E3Q08E93 113 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 RASGEF1BQ0VAM2 473 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 DAZAP2Q15038 168 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF474Q6S9Z5 364 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-218ENST00000489037 ADGRG3Q86Y34 549 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 CLIP4Q8N3C7 705 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 C11orf65Q8NCR3 313 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 HIPK4Q8NE63 616 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 BHLHE22Q8NFJ8 381 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-218ENST00000489037 ABHD3Q8WU67 409 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 SLC35B4Q969S0 331 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 SH3GL1Q99961 368 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 CPPED1Q9BRF8 314 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-218ENST00000489037 POLDIP3Q9BY77 421 aaKnown RBP12.75□□□□□ -0.37
BRCA1-218ENST00000489037 KLHL4Q9C0H6 718 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 C12orf49Q9H741 205 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 KLHL28Q9NXS3 571 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 KLHL13Q9P2N7 655 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 RPS6KB2Q9UBS0 482 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 OSGIN1Q9UJX0 560 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 EDARQ9UNE0 448 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 TEX15Q9BXT5 2789 aa12.75□□□□□ -0.37
BRCA1-218ENST00000489037 SPG11Q96JI7 2443 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 ANKRD17O75179 2603 aaKnown RBP12.74□□□□□ -0.37
BRCA1-218ENST00000489037 IGHV3-15A0A0B4J1V0 119 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 BBIP1A8MTZ0 92 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 DNPH1O43598 174 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 ADAM11O75078 769 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 CTAG2O75638 210 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 FESP07332 822 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 CD1EP15812 388 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 PRKAR1BP31321 381 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 OR2B6P58173 313 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 PLAURQ03405 335 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 RBBP4Q09028 425 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 KLF10Q13118 480 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 CGB2Q6NT52 195 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 MTDHQ86UE4 582 aaKnown RBP12.74□□□□□ -0.37
BRCA1-218ENST00000489037 SLC30A8Q8IWU4 369 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 TUSC5Q8IXB3 177 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 PCYOX1LQ8NBM8 494 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 NAA11Q9BSU3 229 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-218ENST00000489037 MED18Q9BUE0 208 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 ADAM19Q9H013 955 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 IKZF5Q9H5V7 419 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 SAR1AQ9NR31 198 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF226Q9NYT6 803 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 EMC3Q9P0I2 261 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 TMEM181Q9P2C4 612 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 TRAPPC4Q9Y296 219 aa12.74□□□□□ -0.37
BRCA1-218ENST00000489037 AKAP6Q13023 2319 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 ENO4A6NNW6 628 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 EIF1BO60739 113 aaKnown RBP12.73□□□□□ -0.37
BRCA1-218ENST00000489037 CYTIPO60759 359 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 NPPAP01160 153 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 UGT2B10P36537 528 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 ACAA2P42765 397 aaKnown RBP12.73□□□□□ -0.37
BRCA1-218ENST00000489037 MTPNP58546 118 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 KRTAP10-9P60411 292 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 NCALDP61601 193 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 SLC35A1P78382 337 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 TRMT5Q32P41 509 aaKnown RBP12.73□□□□□ -0.37
BRCA1-218ENST00000489037 COQ5Q5HYK3 327 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 RETREG3Q86VR2 466 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 PIGXQ8TBF5 258 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 GPATCH1Q9BRR8 931 aaKnown RBP12.73□□□□□ -0.37
BRCA1-218ENST00000489037 OR11A1Q9GZK7 315 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 CLEC4MQ9H2X3 399 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms