RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 OR2B6P58173 313 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 TXNL4AP83876 142 aaKnown RBP10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 MAPK11Q15759 364 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 Q6ZT83 130 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 YTHDF3Q7Z739 585 aaKnown RBP10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 GALNT5Q7Z7M9 940 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 ATG4DQ86TL0 474 aaPredicted RBP10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 BIVMQ86UB2 503 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 CCDC103Q8IW40 242 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 CMIPQ8IY22 773 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF100Q8IYN0 542 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 POM121Q96HA1 1249 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 MAELQ96JY0 434 aaKnown RBP10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 Q96MF0 132 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 SDR39U1Q9NRG7 319 aaPredicted RBP10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 RLIMQ9NVW2 624 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 TMED7Q9Y3B3 224 aa10.57□□□□□ -0.72
CCHCR1-215ENST00000488920 UBDO15205 165 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 CLOCKO15516 846 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 ANP32DO95626 131 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 PMS2P2O95744 297 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 IGHV3-9P01782 118 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 DBIP07108 87 aaKnown RBP10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 CD3EP07766 207 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 ETFAP13804 333 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 HOXB4P17483 251 aaPredicted RBP10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 IGHV1-2P23083 117 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 TACR3P29371 465 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 NTF4P34130 210 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 CRATP43155 626 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 PTH2RP49190 550 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 POLR2JP52435 117 aaKnown RBP10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 MVDP53602 400 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 GNA13Q14344 377 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 STK11Q15831 433 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 GSTA3Q16772 222 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 GTDC1Q4AE62 458 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 NCMAPQ5T1S8 102 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 MRPL2Q5T653 305 aaKnown RBP10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 ABLIM2Q6H8Q1 611 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 PRSS57Q6UWY2 283 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 PEX5LQ8IYB4 626 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 UBE2J2Q8N2K1 259 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF611Q8N823 705 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 OR9I1Q8NGQ6 314 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 LILRB1Q8NHL6 650 aaPredicted RBP10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 PIWIL2Q8TC59 973 aaKnown RBP10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 TMEM171Q8WVE6 324 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 WDR60Q8WVS4 1066 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 IGFBPL1Q8WX77 278 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 NEUROG1Q92886 237 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 VPS33AQ96AX1 596 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 ZHX1-C8orf76Q96EF9 292 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 ITCHQ96J02 903 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 NGBQ9NPG2 151 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 ZIM2Q9NZV7 527 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 EMC3Q9P0I2 261 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 OSGIN1Q9UJX0 560 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 NOSIPQ9Y314 301 aaKnown RBP10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 HDGFL3Q9Y3E1 203 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 RNF115Q9Y4L5 304 aa10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 FLNAP21333 2647 aaKnown RBP10.56□□□□□ -0.72
CCHCR1-215ENST00000488920 IGKV3D-15A0A087WSY6 115 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 TMEM72A0PK05 275 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 DPRXA6NFQ7 191 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 CFAP73A6NFT4 308 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 TRIM64A6NGJ6 449 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 TRIM64BA6NI03 449 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF716A6NP11 495 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 H7C1Q1 480 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 KLF11O14901 512 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 SMAD7O15105 426 aaKnown RBP10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 RAMP1O60894 148 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 TFPTP0C1Z6 253 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 GKN3PP0CG01 181 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 RPS4Y1P22090 263 aaKnown RBP10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 FKBP2P26885 142 aaKnown RBP10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 SLC1A3P43003 542 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 HTR3AP46098 478 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 CLK1P49759 484 aaKnown RBP10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 POLR2HP52434 150 aaKnown RBP10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 EPS8Q12929 822 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 PDK3Q15120 406 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 C6orf10Q5SRN2 563 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 EPGNQ6UW88 154 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 CLEC9AQ6UXN8 241 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 VRK2Q86Y07 508 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 MIER2Q8N344 545 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 OR52P1PQ8NH57 321 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 SLC38A5Q8WUX1 472 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 PMM1Q92871 262 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 AURKBQ96GD4 344 aaPredicted RBP10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 POTEKPQ9BYX7 375 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 GSX2Q9BZM3 304 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 ESRP2Q9H6T0 727 aaKnown RBP10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 RMND5AQ9H871 391 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 TPT1P8Q9HAU6 139 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 TMEM181Q9P2C4 612 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms