RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 RPS4Y1P22090 263 aaKnown RBP9.9□□□□□ -0.82
NUP98-212ENST00000488828 CXCR1P25024 350 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 HTR3AP46098 478 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 CPA2P48052 419 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 ZNF136P52737 540 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 CTBP2P56545 445 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 EEF1A1P68104 462 aaKnown RBP9.9□□□□□ -0.82
NUP98-212ENST00000488828 SIRPAP78324 504 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 RBBP4Q09028 425 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 FOXF2Q12947 444 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 SELENBP1Q13228 472 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 ADRM1Q16186 407 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 RABL3Q5HYI8 236 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 COQ5Q5HYK3 327 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 GTF2IRD2BQ6EKJ0 949 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 PLEKHM3Q6ZWE6 761 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 GRINAQ7Z429 371 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 GTF2IRD2Q86UP8 949 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 HIPK4Q8NE63 616 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 FAM71CQ8NEG0 241 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 ROBO4Q8WZ75 1007 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 ZNF524Q96C55 264 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 CMTM5Q96DZ9 223 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 DNAJA3Q96EY1 480 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 ZFP3Q96NJ6 502 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 CCDC106Q9BWC9 280 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 KAT8Q9H7Z6 458 aaKnown RBP9.9□□□□□ -0.82
NUP98-212ENST00000488828 ASH1LQ9NR48 2969 aaKnown RBP9.9□□□□□ -0.82
NUP98-212ENST00000488828 CTPS2Q9NRF8 586 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 KLHL28Q9NXS3 571 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 CLCF1Q9UBD9 225 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 RPS6KB2Q9UBS0 482 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 ARL2BPQ9Y2Y0 163 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 ZNF175Q9Y473 711 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 PTPN13Q12923 2485 aa9.9□□□□□ -0.83
NUP98-212ENST00000488828 DSPPQ9NZW4 1301 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 TMED7-TICAM2A0A0A6YYA0 188 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 A6NHS1 94 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 C19orf84I3L1E1 186 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SULT2B1O00204 365 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 FRS3O43559 492 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 PRG2P13727 222 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SHC1P29353 583 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 TACR3P29371 465 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SLC1A3P43003 542 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 POLR2HP52434 150 aaKnown RBP9.89□□□□□ -0.83
NUP98-212ENST00000488828 HOXC5Q00444 222 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 EPS8Q12929 822 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SLC25A53Q5H9E4 307 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 INTS11Q5TA45 600 aaKnown RBP9.89□□□□□ -0.83
NUP98-212ENST00000488828 RNF220Q5VTB9 566 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 EEF1A1P5Q5VTE0 462 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 WBP2NLQ6ICG8 309 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 C3orf33Q6P1S2 294 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 MEX3BQ6ZN04 569 aaKnown RBP9.89□□□□□ -0.83
NUP98-212ENST00000488828 ADGRE4PQ86SQ3 457 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 LUZP2Q86TE4 346 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SERPINA11Q86U17 422 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SLC30A8Q8IWU4 369 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SMYD1Q8NB12 490 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 OR8J3Q8NGG0 315 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 CCT8L2Q96SF2 557 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SFXN3Q9BWM7 321 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 SELENONQ9NZV5 590 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 CHRNA9Q9UGM1 479 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 CLEC4AQ9UMR7 237 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 TMED7Q9Y3B3 224 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 GMEB1Q9Y692 573 aa9.89□□□□□ -0.83
NUP98-212ENST00000488828 GSTA4O15217 222 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 HNRNPRO43390 633 aaKnown RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 TPST1O60507 370 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 DNAJA2O60884 412 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 ADAM11O75078 769 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 AQP8O94778 261 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 NTN1O95631 604 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 OPN1SWP03999 348 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 LORP23490 312 aaPredicted RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 FKBP2P26885 142 aaKnown RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 PRKAR1BP31321 381 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 KCNJ5P48544 419 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 NUDT2P50583 147 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 OR2B6P58173 313 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 NCALDP61601 193 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 CSNK2A1P68400 391 aaPredicted RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 VMACQ2NL98 169 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 CTU2Q2VPK5 515 aaKnown RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 SYT14P1Q58G82 188 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 GKAP1Q5VSY0 366 aaPredicted RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 PATL1Q86TB9 770 aaKnown RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 ADGRG3Q86Y34 549 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 PTOV1Q86YD1 416 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 ZZZ3Q8IYH5 903 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 BHLHE22Q8NFJ8 381 aaPredicted RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 OR52E4Q8NGH9 312 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 SLC25A43Q8WUT9 341 aaPredicted RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 CPNE4Q96A23 557 aaPredicted RBP9.88□□□□□ -0.83
NUP98-212ENST00000488828 DDIT4LQ96D03 193 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 ZHX1-C8orf76Q96EF9 292 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 LRRC37BQ96QE4 947 aa9.88□□□□□ -0.83
NUP98-212ENST00000488828 OR11A1Q9GZK7 315 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms