RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 RNPS1Q15287 305 aaKnown RBP12.65□□□□□ -0.38
COL9A2-208ENST00000488463 GCNT6Q5T4J0 391 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 PPP4R4Q6NUP7 873 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 NUFIP2Q7Z417 695 aaKnown RBP12.65□□□□□ -0.38
COL9A2-208ENST00000488463 PTOV1Q86YD1 416 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 TUSC5Q8IXB3 177 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF440Q8IYI8 595 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 NFKBIDQ8NI38 313 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF563Q8TA94 476 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 BBS10Q8TAM1 723 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 SLC25A43Q8WUT9 341 aaPredicted RBP12.65□□□□□ -0.38
COL9A2-208ENST00000488463 ANKRD27Q96NW4 1050 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 DACH2Q96NX9 599 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 OR5B2Q96R09 309 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 CGREF1Q99674 301 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 PSD2Q9BQI7 771 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 GPATCH1Q9BRR8 931 aaKnown RBP12.65□□□□□ -0.38
COL9A2-208ENST00000488463 BCO1Q9HAY6 547 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 SAR1AQ9NR31 198 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 SERINC1Q9NRX5 453 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 FAM53CQ9NYF3 392 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 ELOVL5Q9NYP7 299 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 PRDM4Q9UKN5 801 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 EMC9Q9Y3B6 208 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 ACANP16112 2415 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 TMED7-TICAM2A0A0A6YYA0 188 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 A0A1W2PPR1 153 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 TMEM72A0PK05 275 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 ZC3H12DA2A288 527 aaKnown RBP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 SH3D21A4FU49 640 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF814B7Z6K7 855 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 SIAH2O43255 324 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 CYTIPO60759 359 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 GCM2O75603 506 aaPredicted RBP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 PRKD3O94806 890 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 TROVE2P10155 538 aaKnown RBP eCLIP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 EDNRAP25101 427 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 TACR3P29371 465 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 HTR3AP46098 478 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 CLK1P49759 484 aaKnown RBP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 POLR2HP52434 150 aaKnown RBP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 ARFIP2P53365 341 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 PCBP3P57721 371 aaKnown RBP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 H3F3AP84243 136 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 CDK6Q00534 326 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 LARS2Q15031 903 aaKnown RBP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 ZSWIM7Q19AV6 140 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 ABLIM2Q6H8Q1 611 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 DHDDSQ86SQ9 333 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 SERPINA11Q86U17 422 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 SLC43A2Q8N370 569 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 NRGNQ92686 78 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 SLC35B4Q969S0 331 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 WFIKKN1Q96NZ8 548 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 IFT52Q9Y366 437 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 TMED7Q9Y3B3 224 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 SETD2Q9BYW2 2564 aaPredicted RBP12.64□□□□□ -0.39
COL9A2-208ENST00000488463 CADP27708 2225 aa12.64□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF716A6NP11 495 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 FXYD1O00168 92 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF208O43345 1280 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 FRS3O43559 492 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 TPST1O60507 370 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 RAMP1O60894 148 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 PMS2P2O95744 297 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 PLGP00747 810 aaPredicted RBP12.63□□□□□ -0.39
COL9A2-208ENST00000488463 FESP07332 822 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 YES1P07947 543 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 VIMP08670 466 aaKnown RBP12.63□□□□□ -0.39
COL9A2-208ENST00000488463 IMPDH2P12268 514 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 POU2F1P14859 743 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 FKBP2P26885 142 aaKnown RBP12.63□□□□□ -0.39
COL9A2-208ENST00000488463 GZMMP51124 257 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 CTBP2P56545 445 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 SF3A3Q12874 501 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL9A2-208ENST00000488463 KLF10Q13118 480 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF311Q5JNZ3 666 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 GTF2IRD2BQ6EKJ0 949 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 REEP3Q6NUK4 255 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 DHRS4L2Q6PKH6 230 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 TFAP2EQ6VUC0 442 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 STAC2Q6ZMT1 411 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 NET1Q7Z628 596 aaPredicted RBP12.63□□□□□ -0.39
COL9A2-208ENST00000488463 MTDHQ86UE4 582 aaKnown RBP12.63□□□□□ -0.39
COL9A2-208ENST00000488463 GTF2IRD2Q86UP8 949 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 C10orf82Q8WW14 230 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 WFDC6Q9BQY6 131 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 KAT8Q9H7Z6 458 aaKnown RBP12.63□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF232Q9UNY5 417 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 TRAPPC4Q9Y296 219 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 HDGFL3Q9Y3E1 203 aa12.63□□□□□ -0.39
COL9A2-208ENST00000488463 PRRC2AP48634 2157 aaKnown RBP12.63□□□□□ -0.39
COL9A2-208ENST00000488463 IGKV3D-15A0A087WSY6 115 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 TMEM247A6NEH6 219 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF724A8MTY0 619 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 EVPLLA8MZ36 301 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 SULT2B1O00204 365 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms