RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 KRTAP1-1Q07627 177 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SLC3A1Q07837 685 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FABP9Q0Z7S8 132 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 GAB1Q13480 694 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TOMM20Q15388 145 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF239Q16600 458 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 C18orf21Q32NC0 220 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ADGRF1Q5T601 910 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PRAMEF18Q5VWM3 479 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 C9orf57Q5W0N0 161 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TAPT1Q6NXT6 567 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SMARCD3Q6STE5 483 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF813Q6ZN06 617 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF621Q6ZSS3 439 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TMPRSS11FQ6ZWK6 438 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ARMCX2Q7L311 632 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TAC4Q86UU9 113 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 NAA40Q86UY6 237 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ANGPTL5Q86XS5 388 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 DCUN1D3Q8IWE4 304 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SLC30A8Q8IWU4 369 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 GPC2Q8N158 579 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 UMODL1-AS1Q8N2C9 162 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF561Q8N587 486 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ARRDC1Q8N5I2 433 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 KCNRGQ8N5I3 272 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RASGEF1AQ8N9B8 481 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RELL2Q8NC24 303 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TMEM185AQ8NFB2 350 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 GOT1L1Q8NHS2 421 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TRMT10AQ8TBZ6 339 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TFGQ92734 400 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SLC25A28Q96A46 364 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MALSU1Q96EH3 234 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RNFT2Q96EX2 444 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 LRR1Q96L50 414 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TAAR9Q96RI9 348 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TEAD3Q99594 435 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SYT3Q9BQG1 590 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 GGACTQ9BVM4 153 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RERGLQ9H628 205 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 HRASLSQ9HDD0 168 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ACKR4Q9NPB9 350 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TLR8Q9NR97 1041 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ABRACLQ9P1F3 81 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 STOX2Q9P2F5 926 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 UXTQ9UBK9 157 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RASD1Q9Y272 281 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FXYD6-FXYD2A0A087WZ82 144 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TRBV4-1A0A0J9YWV2 114 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 POM121BA6NF01 834 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RFPL4AA6NLU0 287 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 E9PI62 339 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RFPL4AL1F8VTS6 287 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PIRO00625 290 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FFAR1O14842 300 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SCAMP2O15127 329 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ARPC1BO15143 372 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 BCL2L11O43521 198 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TLR5O60602 858 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 CLDN9O95484 217 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MPIG6BO95866 241 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 IFNA2P01563 188 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 CHRM5P08912 532 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 GKN3PP0CG01 181 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR12D1P0DN82 309 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF35P13682 527 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PRG2P13727 222 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 GNSP15586 552 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 AMD1P17707 334 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ARF4P18085 180 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ANXA7P20073 488 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAB4AP20338 218 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 CD40P25942 277 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 AQP1P29972 269 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 BDKRB2P30411 391 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 AGTR1P30556 359 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MC4RP32245 332 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PNPLA4P41247 253 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAD52P43351 418 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR1E2P47887 323 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MTNR1AP48039 350 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 CCR8P51685 355 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 H2BFSP57053 126 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAB8AP61006 207 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 CDK5Q00535 292 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ILF3Q12906 894 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ELAVL2Q12926 359 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ALKBH1Q13686 389 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SCARB2Q14108 478 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MELKQ14680 651 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TRAM1Q15629 374 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF630Q2M218 657 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 CR1LQ2VPA4 569 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 DCAF4L1Q3SXM0 396 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PLEKHN1Q494U1 663 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF805Q5CZA5 627 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FBXO47Q5MNV8 452 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PGBD2Q6P3X8 592 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms