RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CLIC1O00299 241 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 FAAHO00519 579 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 KLF4O43474 513 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 HNRNPCL1O60812 293 aaKnown RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 GCM2O75603 506 aaPredicted RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 SASH3O75995 380 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 FESP07332 822 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 NUDT7P0C024 238 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 HNRNPCL4P0DMR1 293 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 BMP2P12643 396 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 CD53P19397 219 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 CCNA2P20248 432 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 LOXP28300 417 aaPredicted RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 TACR3P29371 465 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 ACAA2P42765 397 aaKnown RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 SLC1A3P43003 542 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 CLK1P49759 484 aaKnown RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 POLR2HP52434 150 aaKnown RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 EPS8Q12929 822 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 RGNQ15493 299 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 DEFB113Q30KQ7 82 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 LIN52Q52LA3 116 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 RPS26P11Q5JNZ5 115 aaPredicted RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 ZNF836Q6ZNA1 936 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 LSRQ86X29 649 aaPredicted RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 CXorf67Q86X51 503 aaPredicted RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 ZNF775Q96BV0 537 aaPredicted RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 SPDL1Q96EA4 605 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 DNAJA3Q96EY1 480 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 ALPK1Q96QP1 1244 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 ZNF300Q96RE9 604 aaPredicted RBP10.17□□□□□ -0.78
SPEN-205ENST00000487496 OR10A4Q9H209 315 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 SLC52A3Q9NQ40 469 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 TMEM45AQ9NWC5 275 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 SLC25A37Q9NYZ2 338 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 SLAMF8Q9P0V8 285 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 OSGIN1Q9UJX0 560 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 HDGFL3Q9Y3E1 203 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 CHST2Q9Y4C5 530 aa10.17□□□□□ -0.78
SPEN-205ENST00000487496 HRNRQ86YZ3 2850 aaPredicted RBP10.16□□□□□ -0.78
SPEN-205ENST00000487496 TMED7-TICAM2A0A0A6YYA0 188 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 TMEM72A0PK05 275 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 TMEM247A6NEH6 219 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 NR5A2O00482 541 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 PMS2P2O95744 297 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 ADAP00813 363 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 THBS1P07996 1170 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 GKN3PP0CG01 181 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 UQCRBP14927 111 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 OR3A2P47893 321 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 ATP4BP51164 291 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 MAP2K6P52564 334 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 FADDQ13158 208 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 P2RY6Q15077 328 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 PDK3Q15120 406 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 TSC22D1Q15714 1073 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 BEX5Q5H9J7 111 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 PAGE3Q5JUK9 113 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 LRIF1Q5T3J3 769 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 SFRP5Q5T4F7 317 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 RNF220Q5VTB9 566 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 ABLIM2Q6H8Q1 611 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 MSRB3Q8IXL7 192 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 ZNF440Q8IYI8 595 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 CLIP4Q8N3C7 705 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 STEAP2Q8NFT2 490 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 MAL2Q969L2 176 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 S100PBPQ96BU1 408 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 ZHX1-C8orf76Q96EF9 292 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 THOC1Q96FV9 657 aaKnown RBP10.16□□□□□ -0.78
SPEN-205ENST00000487496 HDHD5Q9BXW7 423 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 ADAM19Q9H013 955 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 RAD21L1Q9H4I0 556 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 BCL2L10Q9HD36 194 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 A4GALTQ9NPC4 353 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 TMEM181Q9P2C4 612 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 PRSS50Q9UI38 385 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 PRDM4Q9UKN5 801 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 ZNF232Q9UNY5 417 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 TRAPPC4Q9Y296 219 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 ZNF443Q9Y2A4 671 aaPredicted RBP10.16□□□□□ -0.78
SPEN-205ENST00000487496 TMED7Q9Y3B3 224 aa10.16□□□□□ -0.78
SPEN-205ENST00000487496 IGKV3D-15A0A087WSY6 115 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.15□□□□□ -0.78
SPEN-205ENST00000487496 ZNF716A6NP11 495 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 ZNF208O43345 1280 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 DNPH1O43598 174 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 IL32P24001 234 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 EDNRAP25101 427 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 OR2B6P58173 313 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 IRX1P78414 480 aaPredicted RBP10.15□□□□□ -0.78
SPEN-205ENST00000487496 H3F3AP84243 136 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 ITGADQ13349 1161 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 SQLEQ14534 574 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 LARS2Q15031 903 aaKnown RBP10.15□□□□□ -0.78
SPEN-205ENST00000487496 ZSWIM7Q19AV6 140 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 AGKQ53H12 422 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 PRAMEF8Q5VWM4 474 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 PRAMEF7Q5VXH5 474 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms