RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 RIN1Q13671 783 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 CBFBQ13951 182 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 TRIP10Q15642 601 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 EFNB3Q15768 340 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 PDLIM3Q53GG5 364 aaPredicted RBP12.96□□□□□ -0.33
PFDN4-204ENST00000487129 PRR31Q5SQ13 230 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 TMCO5AQ8N6Q1 288 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 C3orf56Q8N813 242 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 TOR1AIP2Q8NFQ8 470 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 ST8SIA1Q92185 356 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 DNAJA3Q96EY1 480 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 BOD1Q96IK1 185 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 METTL2AQ96IZ6 378 aaKnown RBP12.96□□□□□ -0.33
PFDN4-204ENST00000487129 TSSK3Q96PN8 268 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 SNX18Q96RF0 628 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 CCT7Q99832 543 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 THUMPD3Q9BV44 507 aaKnown RBP12.96□□□□□ -0.33
PFDN4-204ENST00000487129 OCEL1Q9H607 264 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 METTL17Q9H7H0 456 aaPredicted RBP12.96□□□□□ -0.33
PFDN4-204ENST00000487129 GPATCH2Q9NW75 528 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 TBK1Q9UHD2 729 aa12.96□□□□□ -0.33
PFDN4-204ENST00000487129 TRRAPQ9Y4A5 3859 aa12.96□□□□□ -0.34
PFDN4-204ENST00000487129 A0A1W2PPM1 405 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 FAM157AC9JC47 383 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 GPR171O14626 319 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 BCAS1O75363 584 aaPredicted RBP12.95□□□□□ -0.34
PFDN4-204ENST00000487129 MRPL33O75394 65 aaKnown RBP12.95□□□□□ -0.34
PFDN4-204ENST00000487129 PDE5AO76074 875 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 PMS2P2O95744 297 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 ATP6V1C1P21283 382 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 ASMTP46597 345 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 IDH3GP51553 393 aaPredicted RBP12.95□□□□□ -0.34
PFDN4-204ENST00000487129 CCR4P51679 360 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 ACTG1P63261 375 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 LGALS3BPQ08380 585 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 MERTKQ12866 999 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 PDZK1Q5T2W1 519 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 C1QTNF12Q5T7M4 302 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 TSPO2Q5TGU0 170 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 OR2T11Q8NH01 316 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 CLHC1Q8NHS4 586 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 PIGXQ8TBF5 258 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 FAM216AQ8WUB2 273 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 SLC25A43Q8WUT9 341 aaPredicted RBP12.95□□□□□ -0.34
PFDN4-204ENST00000487129 UBLCP1Q8WVY7 318 aaPredicted RBP12.95□□□□□ -0.34
PFDN4-204ENST00000487129 CCDC126Q96EE4 140 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 CCDC106Q9BWC9 280 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 LAT2Q9GZY6 243 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 IQCGQ9H095 443 aaKnown RBP12.95□□□□□ -0.34
PFDN4-204ENST00000487129 ACER3Q9NUN7 267 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 SH3BP4Q9P0V3 963 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 BAIAP2L1Q9UHR4 511 aa12.95□□□□□ -0.34
PFDN4-204ENST00000487129 B9A039 149 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 GLRA3O75311 464 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 SEC22BO75396 215 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 SHBGP04278 402 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 OR4A8P0C604 315 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 DAOP14920 347 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 CCT5P48643 541 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 NAA20P61599 178 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 PLAURQ03405 335 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 CASP12Q6UXS9 341 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 FRMD7Q6ZUT3 714 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 SPATA19Q7Z5L4 167 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 ZCCHC24Q8N2G6 241 aaKnown RBP12.94□□□□□ -0.34
PFDN4-204ENST00000487129 ZNF614Q8N883 585 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 PSMA8Q8TAA3 256 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 RRAGDQ9NQL2 400 aaPredicted RBP12.94□□□□□ -0.34
PFDN4-204ENST00000487129 C1orf109Q9NX04 203 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 EMCNQ9ULC0 261 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 FLVCR1Q9Y5Y0 555 aa12.94□□□□□ -0.34
PFDN4-204ENST00000487129 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 G3V2L1 256 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 KLF11O14901 512 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 DNPH1O43598 174 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 MPGP29372 298 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 CRHR1P34998 444 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 ARFIP2P53365 341 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 HILS1P60008 231 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 PRPS1P60891 318 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 ZNF141Q15928 474 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 CCDC153Q494R4 210 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 RFTN2Q52LD8 501 aaPredicted RBP12.93□□□□□ -0.34
PFDN4-204ENST00000487129 HIKESHIQ53FT3 197 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 ZYG11AQ6WRX3 759 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 OLIG3Q7RTU3 272 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 ZNF786Q8N393 782 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 CCNYL1Q8N7R7 359 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 FAM71CQ8NEG0 241 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 CHMP6Q96FZ7 201 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 SLC38A2Q96QD8 506 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 SDF2Q99470 211 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 KATNB1Q9BVA0 655 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 ACTRT3Q9BYD9 372 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 OR11A1Q9GZK7 315 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 NMUR2Q9GZQ4 415 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 SERHL2Q9H4I8 314 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 SEC61A2Q9H9S3 476 aa12.93□□□□□ -0.34
PFDN4-204ENST00000487129 CTPS2Q9NRF8 586 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms