RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ASB18Q6ZVZ8 466 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 KCTD8Q6ZWB6 473 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 GRINAQ7Z429 371 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 RANBP3LQ86VV4 465 aaPredicted RBP4.99□□□□□ -1.61
COPS3-209ENST00000486810 C10orf107Q8IVU9 208 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 CFAP206Q8IYR0 622 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 TBC1D3Q8IZP1 549 aaPredicted RBP4.99□□□□□ -1.61
COPS3-209ENST00000486810 PUSL1Q8N0Z8 303 aaKnown RBP4.99□□□□□ -1.61
COPS3-209ENST00000486810 KDM8Q8N371 416 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 C17orf78Q8N4C9 275 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 FAM86B1Q8N7N1 296 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 YIPF7Q8N8F6 280 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 LINC00301Q8NCQ3 95 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 OR8J1Q8NGP2 316 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 OR2L2Q8NH16 312 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 DYNC2LI1Q8TCX1 351 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 RNASE8Q8TDE3 154 aaKnown RBP4.99□□□□□ -1.61
COPS3-209ENST00000486810 CXorf40AQ8TE69 158 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 CACNG8Q8WXS5 425 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 SLCO2A1Q92959 643 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 SLAMF9Q96A28 289 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 BIRC7Q96CA5 298 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 CMTM5Q96DZ9 223 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 CMTM7Q96FZ5 175 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 LRR1Q96L50 414 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 SAMD8Q96LT4 415 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 PRRC1Q96M27 445 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 TMEM56Q96MV1 263 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 GAL3ST4Q96RP7 486 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 CNN2Q99439 309 aaKnown RBP4.99□□□□□ -1.61
COPS3-209ENST00000486810 STACQ99469 402 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 KLF6Q99612 283 aaPredicted RBP4.99□□□□□ -1.61
COPS3-209ENST00000486810 FAM110AQ9BQ89 295 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 HTATIP2Q9BUP3 242 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 SRRQ9GZT4 340 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 SLC5A7Q9GZV3 580 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 TMEM117Q9H0C3 514 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 HIPK2Q9H2X6 1198 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 AUNIPQ9H7T9 357 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 POPDC2Q9HBU9 364 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 CSNK1G1Q9HCP0 422 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 NGBQ9NPG2 151 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 TMEM138Q9NPI0 162 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 POLE4Q9NR33 117 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 LIN7CQ9NUP9 197 aaKnown RBP4.99□□□□□ -1.61
COPS3-209ENST00000486810 MIOSQ9NXC5 875 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 ZNF282Q9UDV7 671 aaPredicted RBP4.99□□□□□ -1.61
COPS3-209ENST00000486810 SLCO3A1Q9UIG8 710 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 SLC25A13Q9UJS0 675 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 SLC22A13Q9Y226 551 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 CLIC4Q9Y696 253 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 TMEM56-RWDD3S4R434 201 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 ABCA8O94911 1581 aa4.99□□□□□ -1.61
COPS3-209ENST00000486810 PTCH1Q13635 1447 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 RIC1Q4ADV7 1423 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 URB2Q14146 1524 aaKnown RBP4.98□□□□□ -1.61
COPS3-209ENST00000486810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.98□□□□□ -1.61
COPS3-209ENST00000486810 PREX2Q70Z35 1606 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 CDC42BPBQ9Y5S2 1711 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 KIR2DS5A0A0G2JLQ3 304 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 A0A1B0GV72 72 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 A0A1W2PPV4 95 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 FAM74A7A6NL05 159 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 ARHGEF33A8MVX0 844 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 BTNL10A8MVZ5 291 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 A8MWP6 167 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 TCP10L2B9ZVM9 353 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 PROB1E7EW31 1015 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 ANHXE9PGG2 379 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 PRAMEF26H0Y7S4 382 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 KLRC4-KLRK1H3BQV0 150 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 KIR2DS3K7RE56 304 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 M0R3G1 203 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 HAS3O00219 553 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 UBDO15205 165 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 INPP4BO15327 924 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 HBP1O60381 514 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 PRAMEF11O60813 436 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 GLRA3O75311 464 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 ATG12O94817 140 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 GABARAPO95166 117 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 CH25HO95992 272 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 IFNA21P01568 189 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 C8GP07360 202 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 ERCC1P07992 297 aaPredicted RBP4.98□□□□□ -1.61
COPS3-209ENST00000486810 MMP2P08253 660 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 HOXC6P09630 235 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 G6PDP11413 515 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 NELFEP18615 380 aaKnown RBP4.98□□□□□ -1.61
COPS3-209ENST00000486810 AOC1P19801 751 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 PVALBP20472 110 aaPredicted RBP4.98□□□□□ -1.61
COPS3-209ENST00000486810 BCKDHBP21953 392 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 EEF1B2P24534 225 aaKnown RBP4.98□□□□□ -1.61
COPS3-209ENST00000486810 TM4SF1P30408 202 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 GCH1P30793 250 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 ICAM3P32942 547 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 CD80P33681 288 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 MAGEA3P43357 314 aa4.98□□□□□ -1.61
COPS3-209ENST00000486810 RFX5P48382 616 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms