RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TMEM179BQ7Z7N9 219 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 GALNT10Q86SR1 603 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF441Q8N8Z8 693 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 OR4C15Q8NGM1 316 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 OR9A2Q8NGT5 310 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC22A8Q8TCC7 542 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 ADAMTS16Q8TE57 1224 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 ADAMTS15Q8TE58 950 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 HDAC2Q92769 488 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 RAB8BQ92930 207 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 ADIPOR1Q96A54 375 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 DHRS1Q96LJ7 313 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 OR7D2Q96RA2 312 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 STACQ99469 402 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 APOL4Q9BPW4 351 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 SERHL2Q9H4I8 314 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 ANKRA2Q9H9E1 313 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 SMURF2Q9HAU4 748 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 DUSP22Q9NRW4 184 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 KIF17Q9P2E2 1029 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 TMEFF2Q9UIK5 374 aaPredicted RBP8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 POFUT2Q9Y2G5 429 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 IFT52Q9Y366 437 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 LYVE1Q9Y5Y7 322 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 PRRC2AP48634 2157 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 DSPPQ9NZW4 1301 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 EXPH5Q8NEV8 1989 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 C2orf92A0A1B0GVN3 265 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 FIGNL2A6NMB9 653 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 C17orf51A8MQB3 221 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 GNB5O14775 395 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 MRPS14O60783 128 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TRIM3O75382 744 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TRAPPC6AO75865 159 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 GADD45GO95257 159 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 LGI1O95970 557 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 S1PR1P21453 382 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 GDF1P27539 372 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 PRKAR1BP31321 381 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 UQCRC1P31930 480 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 IFNA8P32881 189 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 LIMS1P48059 325 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 PRKAG1P54619 331 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 CASP9P55211 416 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TPD52P55327 224 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 GABARAPL2P60520 117 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 CXCR4P61073 352 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 RPS26P62854 115 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 HPCAP84074 193 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 SPIBQ01892 262 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TEKQ02763 1124 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 CRYZQ08257 329 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 MGAT2Q10469 447 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 MAP4K2Q12851 820 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 EXOSC7Q15024 291 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 NTRK2Q16620 822 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ZSWIM7Q19AV6 140 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 MICAQ29983 383 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ARHGAP11BQ3KRB8 267 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 LIN52Q52LA3 116 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 EIPR1Q53HC9 387 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 WIPI1Q5MNZ9 446 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 EXOSC6Q5RKV6 272 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 DHRS4L2Q6PKH6 230 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ARSKQ6UWY0 536 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC29A4Q7RTT9 530 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 C16orf62Q7Z3J2 963 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TSEN54Q7Z6J9 526 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TSPYL5Q86VY4 417 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF786Q8N393 782 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 PARP8Q8N3A8 854 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF615Q8N8J6 731 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 CDRT4Q8N9R6 151 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ATG16L2Q8NAA4 619 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TOR1AIP2Q8NFQ8 470 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 NEIL3Q8TAT5 605 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 FBLIM1Q8WUP2 373 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 DIO2Q92813 273 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 HOXB13Q92826 284 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 SARAFQ96BY9 339 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 GIMAP5Q96F15 307 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 MUS81Q96NY9 551 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 COL21A1Q96P44 957 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 MBOAT4Q96T53 435 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 TIMP4Q99727 224 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 GABARAPL3Q9BY60 117 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 AMBRA1Q9C0C7 1298 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 GRIP2Q9C0E4 1043 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 POLR2J2Q9GZM3 115 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 POLR2J3Q9H1A7 115 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 PIGUQ9H490 435 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ANKRD19PQ9H560 264 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 MTHFD2LQ9H903 347 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF556Q9HAH1 456 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 CXorf21Q9HAI6 301 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 KRT84Q9NSB2 600 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 ACER3Q9NUN7 267 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 KLHL28Q9NXS3 571 aa8.51□□□□□ -1.05
TMEM39A-208ENST00000486159 DNAJB12Q9NXW2 375 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms