RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 SETD2Q9BYW2 2564 aaPredicted RBP17.39■□□□□ 0.38
SNX5-213ENST00000486039 TRBV5-3A0A0A0MS03 114 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 A0A0G2JPF8 293 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 CFAP73A6NFT4 308 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 HNRNPCL2B2RXH8 293 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 HNRNPCL3B7ZW38 293 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 SULT2B1O00204 365 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 CYTIPO60759 359 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 HNRNPCL1O60812 293 aaKnown RBP17.39■□□□□ 0.37
SNX5-213ENST00000486039 GKN3PP0CG01 181 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 HNRNPCL4P0DMR1 293 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 TFPIP10646 304 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 NCF2P19878 526 aaPredicted RBP17.39■□□□□ 0.37
SNX5-213ENST00000486039 CCNA2P20248 432 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 DNASE1P24855 282 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 TFAP2EQ6VUC0 442 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 BEND4Q6ZU67 534 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 CLIP4Q8N3C7 705 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 TMUB1Q9BVT8 246 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 BCL2L10Q9HD36 194 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 KLHL9Q9P2J3 617 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 EDARQ9UNE0 448 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 SPIN1Q9Y657 262 aaPredicted RBP17.39■□□□□ 0.37
SNX5-213ENST00000486039 ITPR3Q14573 2671 aa17.39■□□□□ 0.37
SNX5-213ENST00000486039 TMED7-TICAM2A0A0A6YYA0 188 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 A0A1W2PP18 115 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 TMEM72A0PK05 275 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 TMEM247A6NEH6 219 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 DEFB108AA8MXU0 73 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 FESP07332 822 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 THBS1P07996 1170 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 CD99P14209 185 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 CRYGSP22914 178 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 TACR3P29371 465 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 ACAA2P42765 397 aaKnown RBP17.38■□□□□ 0.37
SNX5-213ENST00000486039 SLC1A3P43003 542 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 HTR3AP46098 478 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 POLR2HP52434 150 aaKnown RBP17.38■□□□□ 0.37
SNX5-213ENST00000486039 CSNK2A1P68400 391 aaPredicted RBP17.38■□□□□ 0.37
SNX5-213ENST00000486039 RASGEF1BQ0VAM2 473 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 RNF220Q5VTB9 566 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 STK32CQ86UX6 486 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 ZNF440Q8IYI8 595 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 ZC3HAV1LQ96H79 300 aaKnown RBP17.38■□□□□ 0.37
SNX5-213ENST00000486039 ZNF300Q96RE9 604 aaPredicted RBP17.38■□□□□ 0.37
SNX5-213ENST00000486039 ADAM19Q9H013 955 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 IKZF5Q9H5V7 419 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 ZNF226Q9NYT6 803 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 PLEKHA6Q9Y2H5 1048 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 TMED7Q9Y3B3 224 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 GMEB1Q9Y692 573 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 ZFHX3Q15911 3703 aa17.38■□□□□ 0.37
SNX5-213ENST00000486039 A0A0G2JND7 137 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 GCM2O75603 506 aaPredicted RBP17.37■□□□□ 0.37
SNX5-213ENST00000486039 PMS2P2O95744 297 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 THBDP07204 575 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 FKBP2P26885 142 aaKnown RBP17.37■□□□□ 0.37
SNX5-213ENST00000486039 CLK1P49759 484 aaKnown RBP17.37■□□□□ 0.37
SNX5-213ENST00000486039 PRAMEF8Q5VWM4 474 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 PRAMEF7Q5VXH5 474 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 DLEU7Q6UYE1 221 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 MTDHQ86UE4 582 aaKnown RBP17.37■□□□□ 0.37
SNX5-213ENST00000486039 TGIF2LYQ8IUE0 185 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 ZNF775Q96BV0 537 aaPredicted RBP17.37■□□□□ 0.37
SNX5-213ENST00000486039 SIKE1Q9BRV8 207 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 SPATA9Q9BWV2 254 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 RSPO3Q9BXY4 272 aaPredicted RBP17.37■□□□□ 0.37
SNX5-213ENST00000486039 RABEP2Q9H5N1 569 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 HDGFL3Q9Y3E1 203 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 MTORP42345 2549 aa17.37■□□□□ 0.37
SNX5-213ENST00000486039 PRRC2AP48634 2157 aaKnown RBP17.36■□□□□ 0.37
SNX5-213ENST00000486039 ZNF208O43345 1280 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 PGM3O95394 542 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 ARAFP10398 606 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 PRG2P13727 222 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 EDNRAP25101 427 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 LARS2Q15031 903 aaKnown RBP17.36■□□□□ 0.37
SNX5-213ENST00000486039 GCNT6Q5T4J0 391 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 ABLIM2Q6H8Q1 611 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 PAMR1Q6UXH9 720 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 CXorf67Q86X51 503 aaPredicted RBP17.36■□□□□ 0.37
SNX5-213ENST00000486039 GABRG1Q8N1C3 465 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 BBS10Q8TAM1 723 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 TACO1Q9BSH4 297 aaKnown RBP17.36■□□□□ 0.37
SNX5-213ENST00000486039 FANCFQ9NPI8 374 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 ZNF232Q9UNY5 417 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 GPR52Q9Y2T5 361 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 IFT52Q9Y366 437 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 HRNRQ86YZ3 2850 aaPredicted RBP17.36■□□□□ 0.37
SNX5-213ENST00000486039 AKAP6Q13023 2319 aa17.36■□□□□ 0.37
SNX5-213ENST00000486039 ZC3H12DA2A288 527 aaKnown RBP17.35■□□□□ 0.37
SNX5-213ENST00000486039 ZNF724A8MTY0 619 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 ZNF814B7Z6K7 855 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 IMPDH2P12268 514 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 UQCRBP14927 111 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 GPX2P18283 190 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 PSMB1P20618 241 aaKnown RBP17.35■□□□□ 0.37
SNX5-213ENST00000486039 PPIBP23284 216 aaKnown RBP17.35■□□□□ 0.37
SNX5-213ENST00000486039 LOXP28300 417 aaPredicted RBP17.35■□□□□ 0.37
SNX5-213ENST00000486039 ZSWIM7Q19AV6 140 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms