RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 POU4F3Q15319 338 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 ZNF311Q5JNZ3 666 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 LRIF1Q5T3J3 769 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 BEND4Q6ZU67 534 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 ZNF550Q7Z398 422 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 TUSC5Q8IXB3 177 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 STON2Q8WXE9 905 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 TMEM120AQ9BXJ8 343 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 A4GALTQ9NPC4 353 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 RLIMQ9NVW2 624 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 KLHL13Q9P2N7 655 aa13.41□□□□□ -0.26
HLA-F-226ENST00000484704 TMED7-TICAM2A0A0A6YYA0 188 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 GOSR1O95249 250 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 FESP07332 822 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 YES1P07947 543 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 THBS1P07996 1170 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 GKN3PP0CG01 181 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 CXCR1P25024 350 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 TACR3P29371 465 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 UGT2B10P36537 528 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 SLC1A3P43003 542 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 ARFIP2P53365 341 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 OR2B6P58173 313 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 RASGEF1BQ0VAM2 473 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 SF3A3Q12874 501 aaKnown RBP eCLIP13.4□□□□□ -0.26
HLA-F-226ENST00000484704 EPS8Q12929 822 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 GUSBP1Q15486 140 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 PAGE3Q5JUK9 113 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 ANKRD34AQ69YU3 496 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 TMPPEQ6ZT21 453 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 DHDDSQ86SQ9 333 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 CDC20BQ86Y33 519 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 KRT73Q86Y46 540 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 TGIF2LYQ8IUE0 185 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 NFKBIDQ8NI38 313 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 MAL2Q969L2 176 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 ZNF524Q96C55 264 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 SPATA9Q9BWV2 254 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 GP6Q9HCN6 339 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 ZNF446Q9NWS9 450 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 SLC25A37Q9NYZ2 338 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 RPS6KB2Q9UBS0 482 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 SLC13A4Q9UKG4 626 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 TMED7Q9Y3B3 224 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 HDGFL3Q9Y3E1 203 aa13.4□□□□□ -0.26
HLA-F-226ENST00000484704 DSPPQ9NZW4 1301 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 CDHR4A6H8M9 788 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 KLK2P20151 261 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 SLC6A2P23975 617 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 CLK1P49759 484 aaKnown RBP13.39□□□□□ -0.27
HLA-F-226ENST00000484704 NFYCQ13952 458 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 RNF220Q5VTB9 566 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 PRAMEF8Q5VWM4 474 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 PRAMEF7Q5VXH5 474 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 ALKBH2Q6NS38 261 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 ZNF100Q8IYN0 542 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 NAA11Q9BSU3 229 aaPredicted RBP13.39□□□□□ -0.27
HLA-F-226ENST00000484704 SPATA5L1Q9BVQ7 753 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 OR11A1Q9GZK7 315 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 CXXC4Q9H2H0 198 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 MRGBPQ9NV56 204 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 FGFR1OP2Q9NVK5 253 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 EMC3Q9P0I2 261 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 VAPAQ9P0L0 249 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 SLAMF8Q9P0V8 285 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 TESMINQ9Y4I5 508 aa13.39□□□□□ -0.27
HLA-F-226ENST00000484704 FAAHO00519 579 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 SMAD9O15198 467 aaKnown RBP13.38□□□□□ -0.27
HLA-F-226ENST00000484704 PGM3O95394 542 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 PPP3CBP16298 524 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 DNASE1P24855 282 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 PCYT1AP49585 367 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 CDK6Q00534 326 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 SCARB2Q14108 478 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 MAPK11Q15759 364 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 MMEL1Q495T6 779 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 METTL21CQ5VZV1 264 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 WBP2NLQ6ICG8 309 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 REEP3Q6NUK4 255 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 NUFIP2Q7Z417 695 aaKnown RBP13.38□□□□□ -0.27
HLA-F-226ENST00000484704 MTDHQ86UE4 582 aaKnown RBP13.38□□□□□ -0.27
HLA-F-226ENST00000484704 ADGRG3Q86Y34 549 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 ZNF775Q96BV0 537 aaPredicted RBP13.38□□□□□ -0.27
HLA-F-226ENST00000484704 PIK3IP1Q96FE7 263 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 FOXC2Q99958 501 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 BCL2L10Q9HD36 194 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
HLA-F-226ENST00000484704 TMEM181Q9P2C4 612 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 OSGIN1Q9UJX0 560 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 ANGPT4Q9Y264 503 aa13.38□□□□□ -0.27
HLA-F-226ENST00000484704 ACANP16112 2415 aa13.37□□□□□ -0.27
HLA-F-226ENST00000484704 TMEM72A0PK05 275 aa13.37□□□□□ -0.27
HLA-F-226ENST00000484704 FAM221AA4D161 298 aa13.37□□□□□ -0.27
HLA-F-226ENST00000484704 PRORSD1PA6NEY8 169 aa13.37□□□□□ -0.27
HLA-F-226ENST00000484704 ZNF208O43345 1280 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms