RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 BCHEP06276 602 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 PABPC4LP0CB38 370 aaKnown RBP8.95□□□□□ -0.98
CPSF4-213ENST00000484112 UBTFL6P0CB48 400 aaPredicted RBP8.95□□□□□ -0.98
CPSF4-213ENST00000484112 ARAFP10398 606 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 SLC6A2P23975 617 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 LSP1P33241 339 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 APOBEC1P41238 236 aaKnown RBP8.95□□□□□ -0.98
CPSF4-213ENST00000484112 KCNJ5P48544 419 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 PCYT1AP49585 367 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 CLK1P49759 484 aaKnown RBP8.95□□□□□ -0.98
CPSF4-213ENST00000484112 CDK6Q00534 326 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 GABPB1Q06547 395 aaPredicted RBP8.95□□□□□ -0.98
CPSF4-213ENST00000484112 NFYCQ13952 458 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 QPRTQ15274 297 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 MAPK11Q15759 364 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 MMEL1Q495T6 779 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 REEP3Q6NUK4 255 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 C3orf33Q6P1S2 294 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 ZNF550Q7Z398 422 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 GRINAQ7Z429 371 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 SPATA21Q7Z572 469 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 CPLX4Q7Z7G2 160 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 TMCO5AQ8N6Q1 288 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 OR8J3Q8NGG0 315 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 OR52P1PQ8NH57 321 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 NANOS1Q8WY41 292 aaKnown RBP8.95□□□□□ -0.98
CPSF4-213ENST00000484112 ZG16BQ96DA0 208 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 TMEM19Q96HH6 336 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 RNF145Q96MT1 663 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 ZNF607Q96SK3 696 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 CPPED1Q9BRF8 314 aaPredicted RBP8.95□□□□□ -0.98
CPSF4-213ENST00000484112 MED18Q9BUE0 208 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 THUMPD3Q9BV44 507 aaKnown RBP8.95□□□□□ -0.98
CPSF4-213ENST00000484112 SERINC1Q9NRX5 453 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 GLRX2Q9NS18 164 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 ACER3Q9NUN7 267 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 GID8Q9NWU2 228 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 SLAMF8Q9P0V8 285 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 DOCK7Q96N67 2140 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 CENPVL1A0A0U1RR11 272 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 A0A1W2PNV4 684 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 CFAP73A6NFT4 308 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 SLC22A20A6NK97 555 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 SNX3O60493 162 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 TNFSF13O75888 250 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 PGM3O95394 542 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 CNOT4O95628 575 aaKnown RBP8.94□□□□□ -0.98
CPSF4-213ENST00000484112 TGM6O95932 706 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 C1QCP02747 245 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 POU2F1P14859 743 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 PRKAR1BP31321 381 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 CD79BP40259 229 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 CCR4P51679 360 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 SIRPAP78324 504 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 CBX1P83916 185 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 FOXF1Q12946 379 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 INTS11Q5TA45 600 aaKnown RBP8.94□□□□□ -0.98
CPSF4-213ENST00000484112 GTF2IRD2BQ6EKJ0 949 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 VWA1Q6PCB0 445 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 NET1Q7Z628 596 aaPredicted RBP8.94□□□□□ -0.98
CPSF4-213ENST00000484112 ARPINQ7Z6K5 226 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 GTF2IRD2Q86UP8 949 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 GGNQ86UU5 652 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 RETREG3Q86VR2 466 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 UBQLNLQ8IYU4 475 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 LILRA2Q8N149 483 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 C11orf65Q8NCR3 313 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 HIPK4Q8NE63 616 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 FBXO27Q8NI29 283 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 ZNF563Q8TA94 476 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 POC1BQ8TC44 478 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 CPNE4Q96A23 557 aaPredicted RBP8.94□□□□□ -0.98
CPSF4-213ENST00000484112 LRRC58Q96CX6 371 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 STARD4Q96DR4 205 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 ADGRG7Q96K78 797 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 KLHL15Q96M94 604 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 HS3ST6Q96QI5 342 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 OPN3Q9H1Y3 402 aaPredicted RBP8.94□□□□□ -0.98
CPSF4-213ENST00000484112 KAT8Q9H7Z6 458 aaKnown RBP8.94□□□□□ -0.98
CPSF4-213ENST00000484112 GP6Q9HCN6 339 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 MCTS1Q9ULC4 181 aaKnown RBP8.94□□□□□ -0.98
CPSF4-213ENST00000484112 ANGPT4Q9Y264 503 aa8.94□□□□□ -0.98
CPSF4-213ENST00000484112 FBP2O00757 339 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 NDUFAB1O14561 156 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 EIF1AYO14602 144 aaKnown RBP8.93□□□□□ -0.98
CPSF4-213ENST00000484112 MSTNO14793 375 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 MRASO14807 208 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 SEC14L5O43304 696 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 ZNF208O43345 1280 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 OIP5O43482 229 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 DNPH1O43598 174 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 GMFGO60234 142 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 CYP7B1O75881 506 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 CRYGSP22914 178 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 SLC1A3P43003 542 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 PTH2RP49190 550 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 SUCLG1P53597 346 aaKnown RBP8.93□□□□□ -0.98
CPSF4-213ENST00000484112 NR1H2P55055 460 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 CLDN15P56746 228 aa8.93□□□□□ -0.98
CPSF4-213ENST00000484112 CLDN20P56880 219 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms