RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 IGHV3-20A0A0C4DH32 117 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 OR6C70A6NIJ9 312 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ELOA3DA6NLF2 546 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 RIIAD1A6NNX1 92 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 PRR23D1E9PI22 279 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 GNB5O14775 395 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 FADS1O60427 444 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 PPP1R3DO95685 299 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 PRR23D2P0DMB1 279 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 HK1P19367 917 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 SLC2A5P22732 501 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 PSMA1P25786 263 aaKnown RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 EMP2P54851 167 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF117Q03924 483 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ITGADQ13349 1161 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 TPBGQ13641 420 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ELOA3BQ3SY89 546 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 SHFQ7M4L6 423 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 SLC15A4Q8N697 577 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 SLC37A3Q8NCC5 494 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ELOA3Q8NG57 546 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 NUBPLQ8TB37 319 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 METTL21AQ8WXB1 218 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 TM9SF4Q92544 642 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF524Q96C55 264 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 WDR77Q9BQA1 342 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ARHGAP9Q9BRR9 750 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 GTPBP2Q9BX10 602 aaKnown RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 HCAR1Q9BXC0 346 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 RNF167Q9H6Y7 350 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 CCDC182A6NF36 153 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 METTL15A6NJ78 407 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 SLC22A31A6NKX4 558 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 NDUFB5O43674 189 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF3P17036 446 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 CCR4P51679 360 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 ACSM1Q08AH1 577 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 ISXQ2M1V0 245 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 OR2G6Q5TZ20 316 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 MRPL14Q6P1L8 145 aaKnown RBP12.09□□□□□ -0.47
CPNE1-225ENST00000483495 TMEM205Q6UW68 189 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 DPY19L2P2Q6ZN68 376 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 DBX2Q6ZNG2 339 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 TMCO5AQ8N6Q1 288 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 LRRC17Q8N6Y2 441 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 AMER2Q8N7J2 671 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 OR9Q1Q8NGQ5 310 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 OR52N1Q8NH53 320 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 S100ZQ8WXG8 99 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-225ENST00000483495 MMP27Q9H306 513 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 MED20Q9H944 212 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 ERVK13-1Q9NX77 482 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 HAO2Q9NYQ3 351 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 TNFRSF10DQ9UBN6 386 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 STUB1Q9UNE7 303 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 VCANP13611 3396 aa12.09□□□□□ -0.47
CPNE1-225ENST00000483495 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 A0A1B0GVG6 124 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 CLDN25C9JDP6 229 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 AGRPO00253 132 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 MEN1O00255 615 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 ADAM10O14672 748 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 ARPC3O15145 178 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 CPNE3O75131 537 aaKnown RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 IFNGP01579 166 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 GP1BAP07359 652 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 SP9P0CG40 484 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 NRG3P56975 720 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 PRPS1P60891 318 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 RPS3AP61247 264 aaKnown RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 EGR4Q05215 589 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 CRMP1Q14194 572 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF74Q16587 644 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF404Q494X3 552 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 LIPKQ5VXJ0 399 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 LCN10Q6JVE6 187 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 MARCH3Q86UD3 253 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 SIRT6Q8N6T7 355 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 AGBL5Q8NDL9 886 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 OR5M3Q8NGP4 307 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 OR8K3Q8NH51 312 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 SECISBP2Q96T21 854 aaKnown RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 TEAD3Q99594 435 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 KLHDC3Q9BQ90 382 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 MESP1Q9BRJ9 268 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 TBL1XR1Q9BZK7 514 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 WDR12Q9GZL7 423 aaKnown RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 WDR54Q9H977 334 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 SIAEQ9HAT2 523 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 HMG20AQ9NP66 347 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 KLHL21Q9UJP4 597 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 CORINQ9Y5Q5 1042 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 HEATR5AQ86XA9 2040 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 MCIDASD6RGH6 385 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 LRRN3E7EW58 273 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 HCRTR2O43614 444 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 PAICSP22234 425 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms