RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PPP4R4Q6NUP7 873 aa16.06■□□□□ 0.16
CPNE1-224ENST00000483359 ATG4DQ86TL0 474 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-224ENST00000483359 PHF10Q8WUB8 498 aaKnown RBP16.06■□□□□ 0.16
CPNE1-224ENST00000483359 UTP4Q969X6 686 aaKnown RBP16.06■□□□□ 0.16
CPNE1-224ENST00000483359 SELENONQ9NZV5 590 aa16.06■□□□□ 0.16
CPNE1-224ENST00000483359 RHCGQ9UBD6 479 aa16.06■□□□□ 0.16
CPNE1-224ENST00000483359 SLC7A7Q9UM01 511 aa16.06■□□□□ 0.16
CPNE1-224ENST00000483359 A0A1W2PNR3 127 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 ZC3H12DA2A288 527 aaKnown RBP16.05■□□□□ 0.16
CPNE1-224ENST00000483359 ERICH4A6NGS2 130 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 ELOA3DA6NLF2 546 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-224ENST00000483359 KDM4EB2RXH2 506 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-224ENST00000483359 FMO6PO60774 539 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 MT-ND1P03886 318 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 THY1P04216 161 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 SLC7A1P30825 629 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 EIF1AXP47813 144 aaKnown RBP16.05■□□□□ 0.16
CPNE1-224ENST00000483359 DLX5P56178 289 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 VLDLRP98155 873 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 TRAP1Q12931 704 aaKnown RBP16.05■□□□□ 0.16
CPNE1-224ENST00000483359 ELOA3BQ3SY89 546 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 SYT14P1Q58G82 188 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 ULK3Q6PHR2 472 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 SPATA24Q86W54 205 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 DOLPP1Q86YN1 238 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 P3H2Q8IVL5 708 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 RPRMLQ8N4K4 120 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 MEIOBQ8N635 442 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 ELOA3Q8NG57 546 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 SLC47A1Q96FL8 570 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 ZNF845Q96IR2 970 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-224ENST00000483359 KLHL15Q96M94 604 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 OR5B2Q96R09 309 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 TRIM15Q9C019 465 aa16.05■□□□□ 0.16
CPNE1-224ENST00000483359 A0A0J9YW62 118 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 DIRAS1O95057 198 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 CTU2Q2VPK5 515 aaKnown RBP16.04■□□□□ 0.16
CPNE1-224ENST00000483359 MTX3Q5HYI7 312 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 C1orf146Q5VVC0 180 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 PM20D2Q8IYS1 436 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 DNAJA4Q8WW22 397 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-224ENST00000483359 SLC41A3Q96GZ6 507 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 ARL5BQ96KC2 179 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 TUBA1CQ9BQE3 449 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 STOML1Q9UBI4 398 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 SPIN1Q9Y657 262 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-224ENST00000483359 TRAPPC13A5PLN9 417 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 FIGNL2A6NMB9 653 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 PLA2G2AP14555 144 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 CPN1P15169 458 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 FUT4P22083 530 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 CASP6P55212 293 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 ZNF613Q6PF04 617 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 Q6ZPB1 254 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-224ENST00000483359 NCCRP1Q6ZVX7 275 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-224ENST00000483359 TSEN54Q7Z6J9 526 aaKnown RBP16.04■□□□□ 0.16
CPNE1-224ENST00000483359 YTHDF3Q7Z739 585 aaKnown RBP16.04■□□□□ 0.16
CPNE1-224ENST00000483359 OR10D3Q8NH80 312 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 TRIB1Q96RU8 372 aa16.04■□□□□ 0.16
CPNE1-224ENST00000483359 GJE1A6NN92 205 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 SEMG1P04279 462 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 SGCBQ16585 318 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 HBMQ6B0K9 141 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 WDR88Q6ZMY6 472 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 ESPNLQ6ZVH7 1005 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 GDF7Q7Z4P5 450 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 SLC25A43Q8WUT9 341 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-224ENST00000483359 DDIT4LQ96D03 193 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 PRRC1Q96M27 445 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 TP63Q9H3D4 680 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-224ENST00000483359 A4GNTQ9UNA3 340 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 AURKCQ9UQB9 309 aa16.03■□□□□ 0.16
CPNE1-224ENST00000483359 CLCA1A8K7I4 914 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 CHP2O43745 196 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 CXCL13O43927 109 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 CIB2O75838 187 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 FABP3P05413 133 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 ACVR2AP27037 513 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 CA7P43166 264 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 BCL2A1Q16548 175 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 RPTNQ6XPR3 784 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 CHMP1BQ7LBR1 199 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 FJX1Q86VR8 437 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 OR2V1Q8NHB1 315 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 ADGRG7Q96K78 797 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 C7orf34Q96L11 122 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 COQ10BQ9H8M1 238 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 NDUFAF4Q9P032 175 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 RIMS3Q9UJD0 308 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 ESPL1Q14674 2120 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 KIAA1549Q9HCM3 1950 aa16.02■□□□□ 0.16
CPNE1-224ENST00000483359 KPNA4O00629 521 aaPredicted RBP16.02■□□□□ 0.15
CPNE1-224ENST00000483359 FFAR1O14842 300 aa16.02■□□□□ 0.15
CPNE1-224ENST00000483359 WDR1O75083 606 aa16.02■□□□□ 0.15
CPNE1-224ENST00000483359 PNMTP11086 282 aa16.02■□□□□ 0.15
CPNE1-224ENST00000483359 RPS3AP61247 264 aaKnown RBP16.02■□□□□ 0.15
CPNE1-224ENST00000483359 MYBPHQ13203 477 aa16.02■□□□□ 0.15
CPNE1-224ENST00000483359 ACSF3Q4G176 576 aaPredicted RBP16.02■□□□□ 0.15
CPNE1-224ENST00000483359 RTL6Q6ICC9 239 aa16.02■□□□□ 0.15
CPNE1-224ENST00000483359 SLC38A4Q969I6 547 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms