RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 IL1RL2Q9HB29 575 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 NT5MQ9NPB1 228 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 UBE2TQ9NPD8 197 aaPredicted RBP2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 PNO1Q9NRX1 252 aaKnown RBP2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 TNFRSF19Q9NS68 423 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 UBAP1Q9NZ09 502 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 IFNKQ9P0W0 207 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 PITPNC1Q9UKF7 332 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 RASD1Q9Y272 281 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC6A5Q9Y345 797 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 RNF115Q9Y4L5 304 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 MYO3BQ8WXR4 1341 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 SYNJ2O15056 1496 aa2.32□□□□□ -2.04
LAPTM4A-202ENST00000483117 A0A087WZ39 114 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 IQCMA0A1B0GVH7 501 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 A0A1W2PPE3 182 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 SMCO2A6NFE2 343 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 IQCF5A8MTL0 148 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RSPH10B2B2RC85 870 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 F5H6K3 240 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 H0YL77 283 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 EI24O14681 340 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 MSH4O15457 936 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 TAPBPO15533 448 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RS1O15537 224 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 LATO43561 262 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 NIPSNAP2O75323 286 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 STX11O75558 287 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 NOL4O94818 638 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 TOXO94900 526 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 NXPH4O95158 308 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 LRATO95237 230 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ECDO95905 644 aaPredicted RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CALCAP01258 141 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 DCNP07585 359 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RSPH10BP0C881 870 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 UMPSP11172 480 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ETS2P15036 469 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CYP11B1P15538 503 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 PCMT1P22061 227 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CCNOP22674 350 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZBTB25P24278 435 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 STOMP27105 288 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 PRDX3P30048 256 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 MAT2AP31153 395 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 HTR2BP41595 481 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RPS5P46782 204 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RFX3P48380 749 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ATP4BP51164 291 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 DUSP3P51452 185 aaPredicted RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 BLVRAP53004 296 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ACLYP53396 1101 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 PLP1P60201 277 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ABCE1P61221 599 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RPS4XP62701 263 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 BDH1Q02338 343 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 KLRC3Q07444 240 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 XRCC4Q13426 336 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 TFDP1Q14186 410 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 TGFBIQ15582 683 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 KNOP1Q1ED39 458 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 FAM106AQ4KMX7 169 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RFTN2Q52LD8 501 aaPredicted RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 XKR4Q5GH76 650 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CELF3Q5SZQ8 465 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ATP1A1-AS1Q5TC04 95 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 FHL5Q5TD97 284 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 LIPNQ5VXI9 398 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 SCYL2Q6P3W7 929 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 TMEM220Q6QAJ8 160 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 REG3GQ6UW15 175 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 SNX20Q7Z614 316 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 KIAA1328Q86T90 577 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CACUL1Q86Y37 369 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ALLCQ8N6M5 410 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CD177Q8N6Q3 437 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 MFSD9Q8NBP5 474 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ICA1LQ8NDH6 482 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 OR10G7Q8NGN6 311 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RHOXF1Q8NHV9 184 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RHEBL1Q8TAI7 183 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 NDNFQ8TB73 568 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 FBXO25Q8TCJ0 367 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 C8orf44Q96CB5 159 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 PELI1Q96FA3 418 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 SDSLQ96GA7 329 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 PCED1BQ96HM7 432 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 JSRP1Q96MG2 331 aaPredicted RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 LINC00167Q96N53 147 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 TECTBQ96PL2 329 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 IL4I1Q96RQ9 567 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CPXM1Q96SM3 734 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 PSMB7Q99436 277 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 TRIM62Q9BVG3 475 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 COMMD4Q9H0A8 199 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 C3orf14Q9HBI5 128 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 POLE4Q9NR33 117 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 MTCH1Q9NZJ7 389 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CIDEBQ9UHD4 219 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 PURGQ9UJV8 347 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms