RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 NUF2Q9BZD4 464 aa17.22■□□□□ 0.35
R3HDM1-215ENST00000483021 C20orf27Q9GZN8 174 aa17.22■□□□□ 0.35
R3HDM1-215ENST00000483021 ALG2Q9H553 416 aa17.22■□□□□ 0.35
R3HDM1-215ENST00000483021 CTPS2Q9NRF8 586 aa17.22■□□□□ 0.35
R3HDM1-215ENST00000483021 BTNL2Q9UIR0 455 aa17.22■□□□□ 0.35
R3HDM1-215ENST00000483021 LIPT1Q9Y234 373 aa17.22■□□□□ 0.35
R3HDM1-215ENST00000483021 NOSIPQ9Y314 301 aaKnown RBP17.22■□□□□ 0.35
R3HDM1-215ENST00000483021 SONP18583 2426 aaKnown RBP17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 OR5H1A6NKK0 313 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 ZNF716A6NP11 495 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 EDNRAP25101 427 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 S100A3P33764 101 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 RYKP34925 604 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 HTR3AP46098 478 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 KCNJ10P78508 379 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 LRRC74AQ0VAA2 488 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 PGGHGQ32M88 737 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 OGFOD2Q6N063 350 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 CMIPQ8IY22 773 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 ZNF433Q8N7K0 673 aaPredicted RBP17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 APH1AQ96BI3 265 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 RADILQ96JH8 1075 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 CCDC115Q96NT0 180 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 GRIP2Q9C0E4 1043 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 MEAF6Q9HAF1 191 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 CR1P17927 2039 aa17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 CHD3Q12873 2000 aaKnown RBP17.21■□□□□ 0.35
R3HDM1-215ENST00000483021 ATRQ13535 2644 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 GOLGA8QA0A0J9YX86 632 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 GOLGA8OA6NCC3 632 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 GOLGA8NF8WBI6 632 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 BCAS1O75363 584 aaPredicted RBP17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 BGNP21810 368 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 CDKN1AP38936 164 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 SLC16A1P53985 500 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 CDH11P55287 796 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 STX3Q13277 289 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 DTX2Q86UW9 622 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 PRIMA1Q86XR5 153 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 UBE2J2Q8N2K1 259 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 TRNT1Q96Q11 434 aaKnown RBP17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 TRAF4Q9BUZ4 470 aaPredicted RBP17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 BARX1Q9HBU1 254 aaPredicted RBP17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 CISD1Q9NZ45 108 aaKnown RBP17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 MGAT4BQ9UQ53 548 aa17.2■□□□□ 0.34
R3HDM1-215ENST00000483021 SHISA9B4DS77 424 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 RNF223E7ERA6 249 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 HMGN4O00479 90 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 ABCD4O14678 606 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 UQCRBP14927 111 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 MAGEA8P43361 318 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 CHRNEQ04844 493 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 DMTNQ08495 405 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 FAPQ12884 760 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 GNA13Q14344 377 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 TMEM108Q6UXF1 575 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 RNF130Q86XS8 419 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 ARL5BQ96KC2 179 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 HS6ST2Q96MM7 605 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 PANX1Q96RD7 426 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 SLCO5A1Q9H2Y9 848 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 ASB6Q9NWX5 421 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 TAS2R16Q9NYV7 291 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 NPAP1Q9NZP6 1156 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 MALT1Q9UDY8 824 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 TRAPPC4Q9Y296 219 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 ABCA1O95477 2261 aa17.19■□□□□ 0.34
R3HDM1-215ENST00000483021 CIB4A0PJX0 185 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 EIF1BO60739 113 aaKnown RBP17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 RAMP1O60894 148 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 MRPL33O75394 65 aaKnown RBP17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 RAD51DO75771 328 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 THBS1P07996 1170 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 IDH2P48735 452 aaKnown RBP17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 POLR2HP52434 150 aaKnown RBP17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 MAP2K6P52564 334 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 PLAURQ03405 335 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 NRF1Q16656 503 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 AGAP6Q5VW22 663 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 OR7E24Q6IFN5 339 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 KLHL17Q6TDP4 642 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 LRRC74BQ6ZQY2 392 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 CROCCP2Q86T23 111 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 ADGRG3Q86Y34 549 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 PMM1Q92871 262 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 DDIT4LQ96D03 193 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 ZG16BQ96DA0 208 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 REG4Q9BYZ8 158 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 OR11A1Q9GZK7 315 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 CENPHQ9H3R5 247 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 AIG1Q9NVV5 245 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 TMEM181Q9P2C4 612 aa17.18■□□□□ 0.34
R3HDM1-215ENST00000483021 COL6A5A8TX70 2615 aa17.17■□□□□ 0.34
R3HDM1-215ENST00000483021 PRAMEF27A3QJZ7 478 aa17.17■□□□□ 0.34
R3HDM1-215ENST00000483021 CCDC154A6NI56 674 aa17.17■□□□□ 0.34
R3HDM1-215ENST00000483021 AGAP5A6NIR3 686 aa17.17■□□□□ 0.34
R3HDM1-215ENST00000483021 CCT8L1PA6NM43 557 aa17.17■□□□□ 0.34
R3HDM1-215ENST00000483021 CLDN24A6NM45 220 aa17.17■□□□□ 0.34
R3HDM1-215ENST00000483021 FAAHO00519 579 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms