RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, human

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM54-206	ENST00000482771	PSMA8	Q8TAA3	256 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	MZB1	Q8WU39	189 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	ZHX1-C8orf76	Q96EF9	292 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	ARL5B	Q96KC2	179 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	SORCS2	Q96PQ0	1159 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	NMUR2	Q9GZQ4	415 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	SLC17A5	Q9NRA2	495 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	CTPS2	Q9NRF8	586 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	MALT1	Q9UDY8	824 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	DNAJC15	Q9Y5T4	150 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	FKBP7	Q9Y680	259 aa		11.21	□□□□□ -0.61
TMEM54-206	ENST00000482771	PDLIM1	O00151	329 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	SCAMP2	O15127	329 aa	Known RBP	11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	CFLAR	O15519	480 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	RIPK2	O43353	540 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	TCF21	O43680	179 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	PLIN3	O60664	434 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	GLRA3	O75311	464 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	PMS2P2	O95744	297 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	CHEK2	O96017	543 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	NEFH	P12036	1026 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	ZNF23	P17027	643 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	CCNA2	P20248	432 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	MATN1	P21941	496 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	RYK	P34925	604 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	SERPINF1	P36955	418 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	APOBEC1	P41238	236 aa	Known RBP	11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	MAGEA8	P43361	318 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	CCT5	P48643	541 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	SLC16A1	P53985	500 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	OR2B6	P58173	313 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	PRPS1	P60891	318 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	SLC25A3	Q00325	362 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	ZNF141	Q15928	474 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	CCDC153	Q494R4	210 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	EIF3M	Q7L2H7	374 aa	Known RBP	11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	DDIAS	Q8IXT1	998 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	RFLNB	Q8N5W9	214 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	ANKS4B	Q8N8V4	417 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	ZNF540	Q8NDQ6	660 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	OR5AK3P	Q8NH89	298 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	ZNF563	Q8TA94	476 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	PIGX	Q8TBF5	258 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	SOX7	Q9BT81	388 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	CCDC106	Q9BWC9	280 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	PLA2G12A	Q9BZM1	189 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	OR11A1	Q9GZK7	315 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	SLC7A10	Q9NS82	523 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	PARPBP	Q9NWS1	579 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	GIMAP2	Q9UG22	337 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	MKLN1	Q9UL63	735 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	AMDHD2	Q9Y303	409 aa		11.2	□□□□□ -0.62
TMEM54-206	ENST00000482771	MGAM2	Q2M2H8	2515 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	TENM1	Q9UKZ4	2725 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	CENPVL1	A0A0U1RR11	272 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	LRP5L	A4QPB2	252 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	TMEM114	B3SHH9	223 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	KLF11	O14901	512 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	STX11	O75558	287 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	UGT2B17	O75795	530 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	CDH2	P19022	906 aa	Predicted RBP	11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	CRHR1	P34998	444 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	SRP14	P37108	136 aa	Known RBP	11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	RPL3	P39023	403 aa	Known RBP	11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	SNRPD2	P62316	118 aa	Known RBP	11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	RPS26	P62854	115 aa	Known RBP	11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	TGFBR3	Q03167	851 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	TSPO2	Q5TGU0	170 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	KANK2	Q63ZY3	851 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	CASP12	Q6UXS9	341 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	C12orf54	Q6X4T0	127 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	SLC46A3	Q7Z3Q1	461 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	C6orf120	Q7Z4R8	191 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	ADGRG3	Q86Y34	549 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	EIF1AD	Q8N9N8	165 aa	Known RBP	11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	MOAP1	Q96BY2	351 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	COQ8B	Q96D53	544 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	BPESC1	Q9GZL8	116 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	CHRNA9	Q9UGM1	479 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	DCTN4	Q9UJW0	460 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	TRAPPC4	Q9Y296	219 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	HDGFL3	Q9Y3E1	203 aa		11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	SPIN1	Q9Y657	262 aa	Predicted RBP	11.19	□□□□□ -0.62
TMEM54-206	ENST00000482771	DUXA	A6NLW8	204 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	ANKRD28	O15084	1053 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	PEX11A	O75192	247 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	SLU7	O95391	586 aa	Known RBP	11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	WNT11	O96014	354 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	FGF4	P08620	206 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	ITGA2	P17301	1181 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	FKBP2	P26885	142 aa	Known RBP	11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	CLK1	P49759	484 aa	Known RBP	11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	H3F3A	P84243	136 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	PTGR1	Q14914	329 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	MAPK14	Q16539	360 aa		11.18	□□□□□ -0.62
TMEM54-206	ENST00000482771	ARHGAP11B	Q3KRB8	267 aa		11.18	□□□□□ -0.62

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