RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 ZNF550Q7Z398 422 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 BBS10Q8TAM1 723 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 MAL2Q969L2 176 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 DDIT4LQ96D03 193 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 ZC3HAV1LQ96H79 300 aaKnown RBP13.21□□□□□ -0.29
OPTN-210ENST00000482140 WFIKKN1Q96NZ8 548 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 SPATA9Q9BWV2 254 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 RLIMQ9NVW2 624 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 VAPAQ9P0L0 249 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 SLAMF8Q9P0V8 285 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 TMED7Q9Y3B3 224 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 HDGFL3Q9Y3E1 203 aa13.21□□□□□ -0.29
OPTN-210ENST00000482140 AKAP6Q13023 2319 aa13.21□□□□□ -0.3
OPTN-210ENST00000482140 ABCA4P78363 2273 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 PDZD2O15018 2839 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 CYTIPO60759 359 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 GKN3PP0CG01 181 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 BMP2P12643 396 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 TACR3P29371 465 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 DNAJA1P31689 397 aaKnown RBP13.2□□□□□ -0.3
OPTN-210ENST00000482140 CCKARP32238 428 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 SLC1A3P43003 542 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 ANKRD34AQ69YU3 496 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 NUFIP2Q7Z417 695 aaKnown RBP13.2□□□□□ -0.3
OPTN-210ENST00000482140 ADGRG3Q86Y34 549 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 MSRB3Q8IXL7 192 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 CADM2Q8N3J6 435 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 NFKBIDQ8NI38 313 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 DNAJA3Q96EY1 480 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 TMEM120AQ9BXJ8 343 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 OR11A1Q9GZK7 315 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 BCL2L10Q9HD36 194 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 SLC52A3Q9NQ40 469 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 OSGIN1Q9UJX0 560 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 NDUFAF1Q9Y375 327 aa13.2□□□□□ -0.3
OPTN-210ENST00000482140 CCDC168Q8NDH2 2452 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 CSMD2Q7Z408 3487 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
OPTN-210ENST00000482140 PGM3O95394 542 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 PMS2P2O95744 297 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 HRGP04196 525 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 VIMP08670 466 aaKnown RBP13.19□□□□□ -0.3
OPTN-210ENST00000482140 ARAFP10398 606 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 PPP3CBP16298 524 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 DNASE1P24855 282 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 CXCR1P25024 350 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 MAP2K6P52564 334 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 OR2B6P58173 313 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 METTL21CQ5VZV1 264 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 WBP2NLQ6ICG8 309 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 DHDDSQ86SQ9 333 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 MTDHQ86UE4 582 aaKnown RBP13.19□□□□□ -0.3
OPTN-210ENST00000482140 KRT73Q86Y46 540 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 CLIP4Q8N3C7 705 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 NINJ1Q92982 152 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 ARL5BQ96KC2 179 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 PSD2Q9BQI7 771 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 SPATA5L1Q9BVQ7 753 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 ZNF385DQ9H6B1 395 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 BCO1Q9HAY6 547 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 FGFR1OP2Q9NVK5 253 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 EMC3Q9P0I2 261 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 ST6GALNAC2Q9UJ37 374 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 PRDM4Q9UKN5 801 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 FREM1Q5H8C1 2179 aa13.19□□□□□ -0.3
OPTN-210ENST00000482140 TRBV5-3A0A0A0MS03 114 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 TMEM72A0PK05 275 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 ZNF208O43345 1280 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 DNPH1O43598 174 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 ETS2P15036 469 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 CRYGSP22914 178 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 SLC6A2P23975 617 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 ARFIP2P53365 341 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 CDK6Q00534 326 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 NFYCQ13952 458 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 SCARB2Q14108 478 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 REEP3Q6NUK4 255 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 TFAP2EQ6VUC0 442 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 STAC2Q6ZMT1 411 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 PIGXQ8TBF5 258 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 TSPEARQ8WU66 669 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 ZNF300Q96RE9 604 aaPredicted RBP13.18□□□□□ -0.3
OPTN-210ENST00000482140 MED4Q9NPJ6 270 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 MRGBPQ9NV56 204 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 C6orf203Q9P0P8 240 aaPredicted RBP13.18□□□□□ -0.3
OPTN-210ENST00000482140 TMEM181Q9P2C4 612 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 GPR52Q9Y2T5 361 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 GMEB1Q9Y692 573 aa13.18□□□□□ -0.3
OPTN-210ENST00000482140 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 CD1EP15812 388 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 GPX2P18283 190 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 KLK2P20151 261 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 IL32P24001 234 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 ACAA2P42765 397 aaKnown RBP13.17□□□□□ -0.3
OPTN-210ENST00000482140 ART1P52961 327 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 IST1P53990 364 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 SLC35A1P78382 337 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 SF3A3Q12874 501 aaKnown RBP eCLIP13.17□□□□□ -0.3
OPTN-210ENST00000482140 RUNDC3AQ59EK9 446 aa13.17□□□□□ -0.3
OPTN-210ENST00000482140 ABLIM2Q6H8Q1 611 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms