RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TMEM80Q96HE8 168 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 CELF6Q96J87 481 aaKnown RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 C9orf85Q96MD7 179 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 ZNF641Q96N77 438 aaPredicted RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 F2RL3Q96RI0 385 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 RNF2Q99496 336 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 TEKT3Q9BXF9 490 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 NAT10Q9H0A0 1025 aaKnown RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 RGCCQ9H4X1 137 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 HAUS4Q9H6D7 363 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 SMYD3Q9H7B4 428 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 MRPS30Q9NP92 439 aaKnown RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 INPP5EQ9NRR6 644 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 NUDT15Q9NV35 164 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 PAK1IP1Q9NWT1 392 aaPredicted RBP4.33□□□□□ -1.72
COPA-203ENST00000481040 AHSPQ9NZD4 102 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 ERVW-1Q9UQF0 538 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 STK38LQ9Y2H1 464 aa4.33□□□□□ -1.72
COPA-203ENST00000481040 SNED1Q8TER0 1413 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 IGHV3OR16-12A0A075B7B8 117 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 IQANK1A0A1B0GTG1 560 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 TCRBV9S1A1TA0A576 114 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 A8MXQ7 604 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 NDUFS8O00217 210 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 TRDMT1O14717 391 aaKnown RBP4.32□□□□□ -1.72
COPA-203ENST00000481040 INSIG1O15503 277 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 PRKYO43930 277 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 SNHG28P0DPA3 235 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 UMPSP11172 480 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 SRMP19623 302 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 MSR1P21757 451 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 PRKXP51817 358 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 GSCP56915 257 aaPredicted RBP4.32□□□□□ -1.72
COPA-203ENST00000481040 SIX1Q15475 284 aaPredicted RBP4.32□□□□□ -1.72
COPA-203ENST00000481040 ZNF876PQ49A33 203 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 SASS6Q6UVJ0 657 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 LRRC74BQ6ZQY2 392 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 RNF130Q86XS8 419 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 ADAMTS16Q8TE57 1224 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 ZNF501Q96CX3 271 aaPredicted RBP4.32□□□□□ -1.72
COPA-203ENST00000481040 C19orf60Q96EN9 201 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 NAF1Q96HR8 494 aaKnown RBP4.32□□□□□ -1.72
COPA-203ENST00000481040 CYP2S1Q96SQ9 504 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 P2RY13Q9BPV8 354 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 OCR1Q9BZK8 76 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 SLC2A6Q9UGQ3 507 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 PHF11Q9UIL8 331 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 NUP50Q9UKX7 468 aa4.32□□□□□ -1.72
COPA-203ENST00000481040 SAMD4AQ9UPU9 718 aaKnown RBP4.32□□□□□ -1.72
COPA-203ENST00000481040 A0A087X002 238 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 VSTM2BA6NLU5 285 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 GABRR3A8MPY1 467 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 FOXI3A8MTJ6 420 aaPredicted RBP4.31□□□□□ -1.72
COPA-203ENST00000481040 IDSB3KWA1 339 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 E7ESA3 106 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 WWP2O00308 870 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 EIF3HO15372 352 aaKnown RBP eCLIP4.31□□□□□ -1.72
COPA-203ENST00000481040 PSTPIP1O43586 416 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 ZFAND5O76080 213 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 LYPD3O95274 346 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 DUS4LO95620 317 aaKnown RBP4.31□□□□□ -1.72
COPA-203ENST00000481040 IGLV2-11P01706 119 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 CD55P08174 381 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 CDK4P11802 303 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 ZNF43P17038 809 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 COX5AP20674 150 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 BCL3P20749 454 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 LEPP41159 167 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 OR1D4P47884 311 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 ATP4BP51164 291 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 RPS14P62263 151 aaKnown RBP4.31□□□□□ -1.72
COPA-203ENST00000481040 CALCOCO2Q13137 446 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 DUSP7Q16829 419 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 CNPY1Q3B7I2 92 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 ARMCX5Q6P1M9 558 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 RFWD3Q6PCD5 774 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 NIPA1Q7RTP0 329 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 MARCH9Q86YJ5 346 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 DCUN1D3Q8IWE4 304 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 SPERTQ8NA61 448 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 DRAXINQ8NBI3 349 aaPredicted RBP4.31□□□□□ -1.72
COPA-203ENST00000481040 B3GNT7Q8NFL0 401 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 TCTEX1D2Q8WW35 142 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 ZBTB9Q96C00 473 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 KCNA7Q96RP8 456 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 TM2D1Q9BX74 207 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 HCAR1Q9BXC0 346 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 ELOVL6Q9H5J4 265 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 ZNF385DQ9H6B1 395 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 FGF22Q9HCT0 170 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 NANSQ9NR45 359 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 LYARQ9NX58 379 aaKnown RBP4.31□□□□□ -1.72
COPA-203ENST00000481040 ANGPTL2Q9UKU9 493 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 RNF24Q9Y225 148 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 L3MBTL1Q9Y468 752 aa4.31□□□□□ -1.72
COPA-203ENST00000481040 CNTNAP2Q9UHC6 1331 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 ERVV-2B6SEH9 535 aa4.3□□□□□ -1.72
COPA-203ENST00000481040 ZNF701M0R085 212 aaPredicted RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 KIF2AO00139 706 aaPredicted RBP4.3□□□□□ -1.72
COPA-203ENST00000481040 HIP1O00291 1037 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms