RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 HMGB4Q8WW32 186 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 AUTS2Q8WXX7 1259 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 OVCA2Q8WZ82 227 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 EDAQ92838 391 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 GCDHQ92947 438 aaPredicted RBP9.86□□□□□ -0.83
SIK3-210ENST00000480468 SLC25A28Q96A46 364 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 TMEM159Q96B96 161 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 SGK3Q96BR1 496 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 SMIM19Q96E16 107 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 SAMD8Q96LT4 415 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 KCNK12Q9HB15 430 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 KRCC1Q9NPI7 259 aaPredicted RBP9.86□□□□□ -0.83
SIK3-210ENST00000480468 HAO2Q9NYQ3 351 aa9.86□□□□□ -0.83
SIK3-210ENST00000480468 AK6Q9Y3D8 172 aaKnown RBP9.86□□□□□ -0.83
SIK3-210ENST00000480468 NUP210Q8TEM1 1887 aaPredicted RBP9.85□□□□□ -0.83
SIK3-210ENST00000480468 SLC5A10A0PJK1 596 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 IFITM5A6NNB3 132 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 ZNF879B4DU55 563 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 FGF16O43320 207 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 TBL1XO60907 577 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 FGBP02675 491 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 FBP1P09467 338 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 SLC25A4P12235 298 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 PRF1P14222 555 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 DDX6P26196 483 aaKnown RBP eCLIP9.85□□□□□ -0.83
SIK3-210ENST00000480468 BDKRB2P30411 391 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 GPR4P46093 362 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 OR12D2P58182 307 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 PDZK1IP1Q13113 114 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 TMEM69Q5SWH9 247 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 FAM180BQ6P0A1 224 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 ZNF813Q6ZN06 617 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 SYT9Q86SS6 491 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 NRMQ8IXM6 262 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 HS6ST3Q8IZP7 471 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 OR1S2Q8NGQ3 325 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 OR13C5Q8NGS8 318 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 C2CD4CQ8TF44 421 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 TNFAIP8L1Q8WVP5 186 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 ZNF707Q96C28 371 aaPredicted RBP9.85□□□□□ -0.83
SIK3-210ENST00000480468 TIFAQ96CG3 184 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 HAVCR1Q96D42 359 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 BBS4Q96RK4 519 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 SEC11CQ9BY50 192 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 EGLN1Q9GZT9 426 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 SLC22A11Q9NSA0 550 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 TRPC4Q9UBN4 977 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 SLC13A4Q9UKG4 626 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 PADI3Q9ULW8 664 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 SH2B3Q9UQQ2 575 aa9.85□□□□□ -0.83
SIK3-210ENST00000480468 CPSF4LA6NMK7 179 aaKnown RBP9.84□□□□□ -0.83
SIK3-210ENST00000480468 COCHO43405 550 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 FMO6PO60774 539 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 VNN2O95498 520 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 RPLP2P05387 115 aaKnown RBP9.84□□□□□ -0.83
SIK3-210ENST00000480468 CTSHP09668 335 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 CALCBP10092 127 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 PRG2P13727 222 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 ABOP16442 354 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 PYCR1P32322 319 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 RPS11P62280 158 aaKnown RBP eCLIP9.84□□□□□ -0.83
SIK3-210ENST00000480468 SNRPEP62304 92 aaKnown RBP9.84□□□□□ -0.83
SIK3-210ENST00000480468 CXADRP78310 365 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 FUT5Q11128 374 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 HABP2Q14520 560 aaPredicted RBP9.84□□□□□ -0.83
SIK3-210ENST00000480468 CDK5R1Q15078 307 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 H3F3CQ6NXT2 135 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 RPTNQ6XPR3 784 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 GPR142Q7Z601 462 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 SYS1Q8N2H4 156 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 LNX2Q8N448 690 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 OR5J2Q8NH18 312 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 C1orf216Q8TAB5 229 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 DERL3Q96Q80 235 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 TEAD3Q99594 435 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 ZCCHC2Q9C0B9 1178 aaKnown RBP9.84□□□□□ -0.83
SIK3-210ENST00000480468 PDGFDQ9GZP0 370 aaPredicted RBP9.84□□□□□ -0.83
SIK3-210ENST00000480468 C1orf198Q9H425 327 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 ADGRL4Q9HBW9 690 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 TAS2R8Q9NYW2 309 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 MIOXQ9UGB7 285 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 PCOLCE2Q9UKZ9 415 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 TNFSF18Q9UNG2 199 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 ZC3H12DA2A288 527 aaKnown RBP9.84□□□□□ -0.83
SIK3-210ENST00000480468 ZNF840PA6NDX5 716 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 TMEM202A6NGA9 273 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 EFCAB7A8K855 629 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 BHLHE40O14503 412 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 SLC25A12O75746 678 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 MELTFP08582 738 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 ZGLP1P0C6A0 271 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 SYN1P17600 705 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 CD52P31358 61 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 LUMP51884 338 aaPredicted RBP9.84□□□□□ -0.83
SIK3-210ENST00000480468 BLOC1S1P78537 153 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 POU4F2Q12837 409 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 NDUFAF6Q330K2 333 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 Q3ZCU0 254 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 GLT8D1Q68CQ7 371 aa9.84□□□□□ -0.83
SIK3-210ENST00000480468 PWWP2BQ6NUJ5 590 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms