RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 APOBEC1P41238 236 aaKnown RBP15.93■□□□□ 0.14
UPF3A-206ENST00000480362 RAD23AP54725 363 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 TBR1Q16650 682 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 RFX4Q33E94 735 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 CDK20Q8IZL9 346 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 ZCCHC14Q8WYQ9 949 aaKnown RBP15.93■□□□□ 0.14
UPF3A-206ENST00000480362 SCMH1Q96GD3 660 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 MRGPRX4Q96LA9 322 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 GPA33Q99795 319 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 TMEM43Q9BTV4 400 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 PAPOLBQ9NRJ5 636 aaKnown RBP15.93■□□□□ 0.14
UPF3A-206ENST00000480362 C20orf141Q9NUB4 165 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 DKKL1Q9UK85 242 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 POFUT2Q9Y2G5 429 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 C15orf41Q9Y2V0 281 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 PCDHGA9Q9Y5G4 932 aaKnown RBP15.93■□□□□ 0.14
UPF3A-206ENST00000480362 CSAG2Q9Y5P2 127 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 SUSD5O60279 629 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 ZIC3O60481 467 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 GPR4P46093 362 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 GSSP48637 474 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 HSPA13P48723 471 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 MEOX1P50221 254 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 CTBP2P56545 445 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 FOXK1P85037 733 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 ALDH6A1Q02252 535 aaKnown RBP15.92■□□□□ 0.14
UPF3A-206ENST00000480362 CRYZQ08257 329 aaKnown RBP15.92■□□□□ 0.14
UPF3A-206ENST00000480362 TOMM20Q15388 145 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 NHSL2Q5HYW2 709 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 KLHL17Q6TDP4 642 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 TMEM178AQ8NBL3 297 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 OR5M1Q8NGP8 315 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 SLC39A7Q92504 469 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 TM9SF4Q92544 642 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 ZBTB8AQ96BR9 441 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 RDH12Q96NR8 316 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 SLC19A3Q9BZV2 496 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 TOR3AQ9H497 397 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 TMEM5Q9Y2B1 443 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 RPH3AQ9Y2J0 694 aaPredicted RBP15.92■□□□□ 0.14
UPF3A-206ENST00000480362 LRRC42Q9Y546 428 aa15.92■□□□□ 0.14
UPF3A-206ENST00000480362 MKRN2OSH3BPM6 223 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 KLF4O43474 513 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 EFNA2O43921 213 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 CDH2P19022 906 aaPredicted RBP15.91■□□□□ 0.14
UPF3A-206ENST00000480362 MAKP20794 623 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 GSTM3P21266 225 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 SRD5A2P31213 254 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 EIF1P41567 113 aaKnown RBP15.91■□□□□ 0.14
UPF3A-206ENST00000480362 CD97P48960 835 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 CXADRP78310 365 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 EGR4Q05215 589 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 COX10Q12887 443 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 TSPAN31Q12999 210 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 IGFL3Q6UXB1 125 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 CD300LDQ6UXZ3 194 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 TMPRSS11FQ6ZWK6 438 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.91■□□□□ 0.14
UPF3A-206ENST00000480362 ZADH2Q8N4Q0 377 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 DHRSXQ8N5I4 330 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 BPIFA2Q96DR5 249 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 MBOAT4Q96T53 435 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 RIBC2Q9H4K1 309 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 REV1Q9UBZ9 1251 aa15.91■□□□□ 0.14
UPF3A-206ENST00000480362 TRAV17A0A0B4J275 112 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 ENO4A6NNW6 628 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 A8MVM7 634 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 CDC42EP2O14613 210 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 FPR3P25089 353 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 GDF1P27539 372 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 ADH6P28332 368 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 POLR2IP36954 125 aaKnown RBP15.9■□□□□ 0.14
UPF3A-206ENST00000480362 RFC3P40938 356 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 PLGLB1Q02325 96 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 GLYR1Q49A26 553 aaPredicted RBP15.9■□□□□ 0.14
UPF3A-206ENST00000480362 C6orf52Q5T4I8 152 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 GTPBP8Q8N3Z3 284 aaPredicted RBP15.9■□□□□ 0.14
UPF3A-206ENST00000480362 ATP6V1C2Q8NEY4 427 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 CYGBQ8WWM9 190 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 SGTBQ96EQ0 304 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 DTNBP1Q96EV8 351 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 ADI1Q9BV57 179 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 TTTY12Q9BZ98 90 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 UBQLN3Q9H347 655 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 SERINC1Q9NRX5 453 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 FAM118AQ9NWS6 357 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 CHRNA9Q9UGM1 479 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 MRPS18CQ9Y3D5 142 aaKnown RBP15.9■□□□□ 0.14
UPF3A-206ENST00000480362 AP4B1Q9Y6B7 739 aa15.9■□□□□ 0.14
UPF3A-206ENST00000480362 URB1O60287 2271 aaKnown RBP15.9■□□□□ 0.14
UPF3A-206ENST00000480362 ZC3H12DA2A288 527 aaKnown RBP15.89■□□□□ 0.13
UPF3A-206ENST00000480362 HTR3EA5X5Y0 456 aa15.89■□□□□ 0.13
UPF3A-206ENST00000480362 UNC119BA6NIH7 251 aa15.89■□□□□ 0.13
UPF3A-206ENST00000480362 EFCAB9A8MZ26 197 aa15.89■□□□□ 0.13
UPF3A-206ENST00000480362 TRAPPC6AO75865 159 aa15.89■□□□□ 0.13
UPF3A-206ENST00000480362 CH25HO95992 272 aa15.89■□□□□ 0.13
UPF3A-206ENST00000480362 OSMP13725 252 aa15.89■□□□□ 0.13
UPF3A-206ENST00000480362 IL11P20809 199 aa15.89■□□□□ 0.13
UPF3A-206ENST00000480362 NPRL3Q12980 569 aa15.89■□□□□ 0.13
UPF3A-206ENST00000480362 TMEM44Q2T9K0 475 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms